coralnet

Development of CoralNet.

https://github.com/coralnet/coralnet

Science Score: 36.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • CITATION.cff file
  • codemeta.json file
    Found codemeta.json file
  • .zenodo.json file
    Found .zenodo.json file
  • DOI references
  • Academic publication links
  • Committers with academic emails
    2 of 12 committers (16.7%) from academic institutions
  • Institutional organization owner
  • JOSS paper metadata
  • Scientific vocabulary similarity
    Low similarity (13.0%) to scientific vocabulary
Last synced: 10 months ago · JSON representation

Repository

Development of CoralNet.

Basic Info
  • Host: GitHub
  • Owner: coralnet
  • License: bsd-2-clause
  • Language: Python
  • Default Branch: main
  • Homepage: http://coralnet.ucsd.edu/
  • Size: 81.3 MB
Statistics
  • Stars: 61
  • Watchers: 8
  • Forks: 6
  • Open Issues: 164
  • Releases: 0
Created over 10 years ago · Last pushed 11 months ago
Metadata Files
Readme Changelog License

README.md

CoralNet

CI Status

CoralNet is a website which serves as a repository and resource for benthic image analysis.

Website home: https://coralnet.ucsd.edu

Read more about us: https://coralnet.ucsd.edu/about/

CoralNet's machine-learning processes are powered by PySpacer: https://github.com/coralnet/pyspacer

Building and viewing the documentation

You can browse the docs right in the GitHub repo under /docs, but GitHub doesn't support some of the ReStructured Text links. The build will get everything working:

  • Download or git clone this repository's code.
  • Install Python and Sphinx. You can do this by either following the installation steps (docs/installation.rst in this repo) until Sphinx is installed, or you can use some other Python environment which already has Sphinx installed.
  • Open a terminal/command line, cd to the docs directory, and run make html. (This command is cross platform, since there's a Makefile as well as a make.bat.)
  • Open docs/_build/html/index.html in a web browser to start browsing the documentation.
  • It's also possible to output in formats other than HTML, if you use make <format> with a different format. See Sphinx's docs.

Owner

  • Name: CoralNet
  • Login: coralnet
  • Kind: organization

GitHub Events

Total
  • Issues event: 12
  • Watch event: 7
  • Delete event: 48
  • Issue comment event: 34
  • Push event: 73
  • Pull request event: 133
  • Fork event: 4
  • Create event: 78
Last Year
  • Issues event: 12
  • Watch event: 7
  • Delete event: 48
  • Issue comment event: 34
  • Push event: 73
  • Pull request event: 133
  • Fork event: 4
  • Create event: 78

Committers

Last synced: 10 months ago

All Time
  • Total Commits: 2,850
  • Total Committers: 12
  • Avg Commits per committer: 237.5
  • Development Distribution Score (DDS): 0.513
Past Year
  • Commits: 257
  • Committers: 1
  • Avg Commits per committer: 257.0
  • Development Distribution Score (DDS): 0.0
Top Committers
Name Email Commits
StephenChan s****n@g****m 1,387
StephenChan S****n@u****m 664
Oscar Beijbom o****m@g****m 296
Devang Sampat d****7@g****m 222
obeijbom o****m@u****u 177
Jeff Sandvik j****k@g****m 67
andrew Hu a****w@u****) 32
Andrew Hu a****w@m****u 1
Oscar Beijbom o****r@n****m 1
Oscar Beijbom o****r@n****m 1
kriegman 5****n@u****m 1
unknown M****e@.****) 1
Committer Domains (Top 20 + Academic)

Issues and Pull Requests

Last synced: 11 months ago

All Time
  • Total issues: 42
  • Total pull requests: 181
  • Average time to close issues: about 2 years
  • Average time to close pull requests: 2 days
  • Total issue authors: 4
  • Total pull request authors: 4
  • Average comments per issue: 2.14
  • Average comments per pull request: 0.22
  • Merged pull requests: 161
  • Bot issues: 0
  • Bot pull requests: 2
Past Year
  • Issues: 10
  • Pull requests: 115
  • Average time to close issues: 37 minutes
  • Average time to close pull requests: 1 day
  • Issue authors: 1
  • Pull request authors: 2
  • Average comments per issue: 0.0
  • Average comments per pull request: 0.21
  • Merged pull requests: 99
  • Bot issues: 0
  • Bot pull requests: 0
Top Authors
Issue Authors
  • StephenChan (37)
  • Jordan-Pierce (5)
  • premchedella (2)
  • beijbom (1)
  • jorisguerin (1)
Pull Request Authors
  • StephenChan (222)
  • Virtlink (4)
  • dependabot[bot] (4)
  • beijbom (1)
Top Labels
Issue Labels
bug (7) vision backend (7) dev experience (6) performance (5) packages (4) data-integrity (3) annotation (3) question (3) labels (2) browse (2) documentation (1) source (1) refactor (1) enhancement (1) unittests (1) export (1) user accounts (1) annotation tool (1)
Pull Request Labels
performance (24) bug (15) jobs (14) dev experience (9) vision backend (7) map (5) export (4) upload (4) dependencies (4) packages (4) api (4) annotation (3) data-integrity (3) unittests (3) user experience (3) page layouts (2) labels (2) calcification (2) source (2) refactor (2) browse (2) metadata (1)

Dependencies

requirements/base.txt pypi
  • Django >=2.2.20,<3.0
  • Markdown >=3.1.1,<4
  • Pillow ==8.2.0
  • amqp ==1.4.9
  • anyjson ==0.3.3
  • beautifulsoup4 >=4.8.1,<4.9
  • billiard ==3.3.0.23
  • boto ==2.40.0
  • celery ==3.1.23
  • django-guardian ==2.3.0
  • django-markdownx ==3.0.1
  • django-migration-testcase ==0.0.15
  • django-registration ==3.1.2
  • django-reversion ==3.0.9
  • django-storages ==1.8
  • djangorestframework ==3.12.2
  • easy-thumbnails ==2.6.0
  • kombu ==3.0.35
  • numpy ==1.18.1
  • piexif ==1.1.3
  • psycopg2-binary >=2.7.7,<2.8
  • pyexcel ==0.6.6
  • pyexcel-xlsx ==0.6.0
  • redis ==2.10.5
  • requests ==2.25.1
  • selenium ==3.141.0
  • supervisor >=4.1.0,<4.2
  • tqdm ==4.43.0
  • unipath ==1.1
requirements/local.txt pypi
  • Sphinx *
  • chardet ==3.0.4
  • coverage *
  • pre-commit ==2.10.1
requirements/production.txt pypi
  • cchardet ==2.1.4
  • gunicorn >=19.9.0,<19.10
.github/workflows/django.yml actions
  • actions/checkout v2 composite
  • actions/setup-python v2 composite
  • postgres 10.8 docker