niche_vlaanderen
Python package to run the NICHE Vlaanderen model
Science Score: 36.0%
This score indicates how likely this project is to be science-related based on various indicators:
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○CITATION.cff file
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✓codemeta.json file
Found codemeta.json file -
✓.zenodo.json file
Found .zenodo.json file -
○DOI references
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✓Academic publication links
Links to: zenodo.org -
○Committers with academic emails
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○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (10.2%) to scientific vocabulary
Keywords
lifewatch
oscibio
package
python
vegetation
Keywords from Contributors
water
open-science
weather
data-access
parsing
biodiversity
ecology
biodiversity-informatics
biodiversity-standards
gbif
Last synced: 6 months ago
·
JSON representation
Repository
Python package to run the NICHE Vlaanderen model
Basic Info
- Host: GitHub
- Owner: inbo
- License: mit
- Language: AGS Script
- Default Branch: master
- Homepage: https://inbo.github.io/niche_vlaanderen/
- Size: 27.2 MB
Statistics
- Stars: 5
- Watchers: 5
- Forks: 2
- Open Issues: 6
- Releases: 8
Topics
lifewatch
oscibio
package
python
vegetation
Created over 8 years ago
· Last pushed about 1 year ago
Metadata Files
Readme
Changelog
Contributing
License
Authors
README.rst
################
Niche Vlaanderen
################
.. image:: https://github.com/inbo/niche_vlaanderen/actions/workflows/tests-coverage.yml/badge.svg
:target: https://github.com/inbo/niche_vlaanderen/actions/workflows/tests-coverage.yml
.. image:: https://coveralls.io/repos/github/inbo/niche_vlaanderen/badge.png?branch=master
:target: https://coveralls.io/github/inbo/niche_vlaanderen?branch=master
.. image:: https://zenodo.org/badge/102339389.svg
:target: https://zenodo.org/badge/latestdoi/102339389
(Nederlandstalige versie hieronder / Dutch version below)
NICHE Vlaanderen (*Nature Impact Assessment of Changes in Hydro-Ecological Systems*) is a **hydro-ecological model** that predicts the potential occurrence of (ground)water-dependent vegetation types in an area based on information about the (abiotic) site conditions. NICHE Vlaanderen can be used to evaluate the impact of changes in the water management to groundwater-dependent vegetation.
The model is based on a number of location factors that are important for the vegetation: soil type, hydrology, nutrient availability and acidity.
Based on calculated abiotic properties of the location NICHE Vlaanderen determines whether certain vegetation types can develop. An additional *flooding module* allows the user to test whether the predicted vegetations are compatible with a particular flooding regime.
This project is a redevelopment of an existing ArcGIS plugin in Python, without external non-open source dependencies.
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NICHE Vlaanderen (*Nature Impact Assessment of Changes in Hydro-Ecological Systems*) is een **hydro-ecologisch model** dat de potenties voor (grond)waterafhankelijke vegetatietypes in een gebied berekent op basis van informatie over de (abiotische) standplaatscondities. NICHE Vlaanderen kan ingezet worden om de effecten van ingrepen in de waterhuishouding op grondwaterafhankelijke vegetaties te evalueren.
Het model is gebaseerd op een aantal voor de vegetatie bepalende standplaatsfactoren: bodemtype, hydrologie, voedselrijkdom en zuurgraad. Op grond van de berekende abiotische kenmerken van de standplaats bepaalt NICHE Vlaanderen of bepaalde vegetatietypes zich al dan niet kunnen ontwikkelen. Met een bijkomende *overstromingsmodule* kunnen de potenties verder getoetst worden aan de compatibiliteit met een bepaald overstromingsregime.
Dit project is een herontwikkeling van een bestaande ArcGIS plugin in Python, zonder externe non-open source dependencies.
License - Licentie
===================
This project is licensed under the MIT License, see `LICENSE `_ for more information.
Dit project maakt gebruik van de MIT Licentie, zie `LICENSE `_ voor meer informatie.
Documentation - Documentatie
=============================
The documentation of this project is available at https://inbo.github.io/niche_vlaanderen/
De documentatie van dit project kan geraadpleegd worden via https://inbo.github.io/niche_vlaanderen/
Owner
- Name: Research Institute for Nature and Forest (INBO)
- Login: inbo
- Kind: organization
- Location: Belgium
- Website: http://www.inbo.be/en
- Repositories: 125
- Profile: https://github.com/inbo
Open source, data and science initiatives of the Research Institute for Nature and Forest (INBO)
GitHub Events
Total
- Create event: 4
- Release event: 1
- Issues event: 6
- Delete event: 5
- Issue comment event: 9
- Push event: 17
- Pull request review event: 1
- Pull request event: 9
Last Year
- Create event: 4
- Release event: 1
- Issues event: 6
- Delete event: 5
- Issue comment event: 9
- Push event: 17
- Pull request review event: 1
- Pull request event: 9
Committers
Last synced: 6 months ago
Top Committers
| Name | Commits | |
|---|---|---|
| Johan Van de Wauw | j****n@g****e | 812 |
| cecileherr | 3****r@u****m | 89 |
| DriesAdriaens | 3****s@u****m | 75 |
| stijnvanhoey | s****y@g****m | 28 |
| pyup-bot | g****t@p****o | 26 |
| Stijn Van Hoey | s****n@f****m | 16 |
| Johan Van de Wauw | j****n@f****m | 7 |
| Johan Van de Wauw | j****w@g****m | 3 |
| Peter Desmet | p****k@g****m | 1 |
| dependabot[bot] | 4****]@u****m | 1 |
Committer Domains (Top 20 + Academic)
Issues and Pull Requests
Last synced: 6 months ago
All Time
- Total issues: 70
- Total pull requests: 66
- Average time to close issues: 6 months
- Average time to close pull requests: 19 days
- Total issue authors: 6
- Total pull request authors: 7
- Average comments per issue: 1.76
- Average comments per pull request: 0.48
- Merged pull requests: 57
- Bot issues: 0
- Bot pull requests: 1
Past Year
- Issues: 2
- Pull requests: 10
- Average time to close issues: 12 days
- Average time to close pull requests: 14 days
- Issue authors: 1
- Pull request authors: 4
- Average comments per issue: 0.5
- Average comments per pull request: 1.5
- Merged pull requests: 6
- Bot issues: 0
- Bot pull requests: 0
Top Authors
Issue Authors
- johanvdw (37)
- cecileherr (22)
- stijnvanhoey (6)
- DriesAdriaens (2)
- Wardlorenz (2)
- peterdesmet (1)
Pull Request Authors
- johanvdw (41)
- stijnvanhoey (18)
- cecileherr (14)
- geohydrodata (2)
- dependabot[bot] (2)
- pyup-bot (2)
- Sachagobeyn (2)
Top Labels
Issue Labels
enhancement (9)
bug (5)
question (1)
wontfix (1)
Pull Request Labels
documentation (2)
dependencies (2)
enhancement (1)
Packages
- Total packages: 1
-
Total downloads:
- pypi 174 last-month
- Total dependent packages: 0
- Total dependent repositories: 1
- Total versions: 21
- Total maintainers: 2
pypi.org: niche-vlaanderen
NICHE Vlaanderen: hydro-ecological model for valley-ecosystems in Flanders
- Homepage: https://github.com/inbo/niche_vlaanderen
- Documentation: https://niche-vlaanderen.readthedocs.io/
- License: MIT
-
Latest release: 0.0.1
published over 8 years ago
Rankings
Dependent packages count: 7.3%
Stargazers count: 21.6%
Dependent repos count: 22.1%
Average: 22.8%
Forks count: 30.0%
Downloads: 32.9%
Last synced:
6 months ago
Dependencies
.github/workflows/pages.yml
actions
- actions/checkout v2.3.1 composite
- peaceiris/actions-gh-pages v3 composite
.github/workflows/publish.yml
actions
- actions/checkout v2 composite
- pypa/gh-action-pypi-publish release/v1 composite
.github/workflows/tests-coverage.yml
actions
- actions/checkout v2 composite
- actions/checkout v2.3.1 composite
- actions/setup-python v1 composite
- conda-incubator/setup-miniconda v2 composite
- coverallsapp/github-action master composite
dev-requirements.txt
pypi
- matplotlib * development
- pytest >=4.6 development
- pytest-cov * development
- wheel * development
doc-requirements.txt
pypi
- Jinja2 ==3.0.3
- Pygments ==2.11.2
- Sphinx ==4.3.2
- click ==8.0.3
- ipykernel *
- jupyter_client *
- matplotlib *
- nbsphinx *
- pandoc ==2.0.1
- sphinx_rtd_theme ==1.0.0
requirements.txt
pypi
- geopandas *
- numpy *
- pandas *
- pygeos *
- pyyaml *
- rasterio *
- rasterstats >=0.17
- tqdm *
setup.py
pypi