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plant-trait-ontology

Explore the Plant Trait Ontology on the Planteome site.

https://github.com/planteome/plant-trait-ontology

Science Score: 46.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ✓
    .zenodo.json file
    Found .zenodo.json file
  • ○
    DOI references
  • ✓
    Academic publication links
    Links to: zenodo.org
  • ✓
    Committers with academic emails
    11 of 24 committers (45.8%) from academic institutions
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (3.8%) to scientific vocabulary

Keywords

obo obofoundry owl phenotype plant-trait-ontology plant-traits

Keywords from Contributors

ontology sustainable-development-goals semantics planetary-science esip ecology ecoinformatics earth-science data-management semantic-web
Last synced: 10 months ago · JSON representation

Repository

Explore the Plant Trait Ontology on the Planteome site.

Basic Info
Statistics
  • Stars: 46
  • Watchers: 22
  • Forks: 13
  • Open Issues: 255
  • Releases: 18
Topics
obo obofoundry owl phenotype plant-trait-ontology plant-traits
Created about 11 years ago · Last pushed 11 months ago
Metadata Files
Readme License

README.md

DOI Build Status NSF-1340112

This is the repository for the Plant Trait Ontology.

The current release version of the TO can be accessed through the official PURLs:

  • http://purl.obolibrary.org/obo/to.owl
  • http://purl.obolibrary.org/obo/to.obo
  • http://purl.obolibrary.org/obo/to/subsets/to-basic.obo

Or via http://planteome.org/

All releases can be found here: https://github.com/Planteome/plant-trait-ontology/releases

Owner

  • Name: The Planteome Project
  • Login: Planteome
  • Kind: organization
  • Location: Corvallis, OR, USA

Home for the Common Reference Ontologies for Plants

GitHub Events

Total
  • Create event: 2
  • Release event: 1
  • Issues event: 2
  • Watch event: 5
  • Issue comment event: 7
  • Push event: 124
  • Pull request event: 4
  • Gollum event: 19
  • Fork event: 1
Last Year
  • Create event: 2
  • Release event: 1
  • Issues event: 2
  • Watch event: 5
  • Issue comment event: 7
  • Push event: 124
  • Pull request event: 4
  • Gollum event: 19
  • Fork event: 1

Committers

Last synced: 10 months ago

All Time
  • Total Commits: 1,420
  • Total Committers: 24
  • Avg Commits per committer: 59.167
  • Development Distribution Score (DDS): 0.725
Past Year
  • Commits: 186
  • Committers: 3
  • Avg Commits per committer: 62.0
  • Development Distribution Score (DDS): 0.269
Top Committers
Name Email Commits
cooperl09 c****l@s****u 390
Justin Elser e****j@s****u 256
cooperl09 c****l@o****u 238
marieALaporte m****e@g****m 142
moorel m****l@6****4 80
pankaj p****j@6****4 72
Ethan Johnson j****h@c****u 57
Chris Mungall c****m@b****g 52
cooperl c****l@6****4 49
austinmeier m****a@s****u 33
Ethan Johnson j****h@c****u 16
Martin Larralde m****e@e****r 8
cwt6 c****6@6****4 7
Laurel Cooper c****l@1****u 4
Laurel Cooper c****l@1****u 4
DoctorBud d****n@q****m 2
ejohnson1 j****h@o****u 2
elserj e****j@u****m 2
Charles Tapley Hoyt c****t@g****m 1
Laurel Cooper c****l@1****u 1
cjm c****m@6****4 1
cjmungall c****l@l****v 1
seymourmegan m****1@g****m 1
zeamary z****y@6****4 1
Committer Domains (Top 20 + Academic)
science.oregonstate.edu: 3 lbl.gov: 1 128-193-227-181.science.oregonstate.edu: 1 onid.oregonstate.edu: 1 quantumclay.com: 1 128-193-227-165.science.oregonstate.edu: 1 128-193-226-179.science.oregonstate.edu: 1 ens-cachan.fr: 1 cord3087-pc6.science.oregonstate.edu: 1 berkeleybop.org: 1 cord3086-pc6.science.oregonstate.edu: 1 oregonstate.edu: 1

Issues and Pull Requests

Last synced: 11 months ago

All Time
  • Total issues: 77
  • Total pull requests: 29
  • Average time to close issues: over 2 years
  • Average time to close pull requests: 22 days
  • Total issue authors: 23
  • Total pull request authors: 8
  • Average comments per issue: 1.06
  • Average comments per pull request: 0.76
  • Merged pull requests: 23
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 2
  • Pull requests: 2
  • Average time to close issues: 7 days
  • Average time to close pull requests: 15 days
  • Issue authors: 2
  • Pull request authors: 2
  • Average comments per issue: 1.5
  • Average comments per pull request: 0.5
  • Merged pull requests: 1
  • Bot issues: 0
  • Bot pull requests: 0
View more stats
Top Authors
Issue Authors
  • planteome-user (20)
  • celineaubert (13)
  • cooperl09 (10)
  • sammyjava (5)
  • marieALaporte (3)
  • easr (3)
  • cmungall (2)
  • bradfordcondon (2)
  • cthoyt (2)
  • diatomsRcool (2)
  • ScottKalberer (2)
  • ramonawalls (2)
  • LilyAndres (1)
  • richardostler (1)
  • jaiswalp (1)
Pull Request Authors
  • marieALaporte (19)
  • cthoyt (3)
  • scicrow (2)
  • cooperl09 (2)
  • diatomsRcool (2)
  • DoctorBud (1)
  • althonos (1)
  • sammyjava (1)
Top Labels
Issue Labels
From SourceForge (20) Request: New ontology term(s) (8) Plant Morphology Trait (7) Existing term-related revision or comment (5) low priority (3) high priority (3) Quality Trait (2) Yield Trait (2) Creation Request (1) Stress Trait (1) Plant Growth and Development Trait (1)
Pull Request Labels