https://github.com/alexandersouthan/pypreprocessing

Especially useful for preprocessing of datasets like Raman spectra, infrared spectra, UV/Vis spectra, but also HPLC data and many other types of data. pyPreprocessing includes baseline correction, smoothing, filtering, normalization and transformation.

https://github.com/alexandersouthan/pypreprocessing

Science Score: 10.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • CITATION.cff file
  • codemeta.json file
  • .zenodo.json file
  • DOI references
  • Academic publication links
  • Committers with academic emails
    1 of 4 committers (25.0%) from academic institutions
  • Institutional organization owner
  • JOSS paper metadata
  • Scientific vocabulary similarity
    Low similarity (7.5%) to scientific vocabulary

Keywords

baseline-correction data-analysis data-preprocessing python smoothing spectroscopy
Last synced: 6 months ago · JSON representation

Repository

Especially useful for preprocessing of datasets like Raman spectra, infrared spectra, UV/Vis spectra, but also HPLC data and many other types of data. pyPreprocessing includes baseline correction, smoothing, filtering, normalization and transformation.

Basic Info
  • Host: GitHub
  • Owner: AlexanderSouthan
  • License: mit
  • Language: Python
  • Default Branch: master
  • Homepage:
  • Size: 107 KB
Statistics
  • Stars: 18
  • Watchers: 1
  • Forks: 4
  • Open Issues: 0
  • Releases: 0
Topics
baseline-correction data-analysis data-preprocessing python smoothing spectroscopy
Created about 6 years ago · Last pushed 10 months ago
Metadata Files
Readme License

README.md

License: MIT build workflow codecov

pyPreprocessing

General information

For preprocessing of datasets like Raman spectra, infrared spectra, UV/Vis spectra, but also HPLC data and many other types of data, currently via baseline correction, smoothing, filtering, transformation, normalization and derivative. It relies on numpy, pandas, scipy, tqdm and scikit-learn, but also on https://github.com/AlexanderSouthan/pyDataFitting for the introduction of equality constraints into the polynomial baseline estimation methods, and https://github.com/AlexanderSouthan/little_helpers.

Documentation

Please visit: https://alexandersouthan.github.io/pyPreprocessing/

Owner

  • Name: Alexander Southan
  • Login: AlexanderSouthan
  • Kind: user

GitHub Events

Total
  • Watch event: 3
  • Push event: 3
Last Year
  • Watch event: 3
  • Push event: 3

Committers

Last synced: about 2 years ago

All Time
  • Total Commits: 105
  • Total Committers: 4
  • Avg Commits per committer: 26.25
  • Development Distribution Score (DDS): 0.657
Past Year
  • Commits: 4
  • Committers: 1
  • Avg Commits per committer: 4.0
  • Development Distribution Score (DDS): 0.0
Top Committers
Name Email Commits
Alexander Southan 7****n 36
Snijderfrey p****y@w****e 27
Snijderfrey 5****y 22
Southan a****n@i****e 20
Committer Domains (Top 20 + Academic)

Issues and Pull Requests

Last synced: 6 months ago

All Time
  • Total issues: 0
  • Total pull requests: 0
  • Average time to close issues: N/A
  • Average time to close pull requests: N/A
  • Total issue authors: 0
  • Total pull request authors: 0
  • Average comments per issue: 0
  • Average comments per pull request: 0
  • Merged pull requests: 0
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 0
  • Pull requests: 0
  • Average time to close issues: N/A
  • Average time to close pull requests: N/A
  • Issue authors: 0
  • Pull request authors: 0
  • Average comments per issue: 0
  • Average comments per pull request: 0
  • Merged pull requests: 0
  • Bot issues: 0
  • Bot pull requests: 0
Top Authors
Issue Authors
Pull Request Authors
Top Labels
Issue Labels
Pull Request Labels

Packages

  • Total packages: 1
  • Total downloads:
    • pypi 32 last-month
  • Total dependent packages: 0
  • Total dependent repositories: 1
  • Total versions: 2
  • Total maintainers: 1
pypi.org: pypreprocessing

package preprocessing of datasets, especially from spectroscopy

  • Versions: 2
  • Dependent Packages: 0
  • Dependent Repositories: 1
  • Downloads: 32 Last month
Rankings
Dependent packages count: 10.1%
Forks count: 16.9%
Stargazers count: 17.7%
Dependent repos count: 21.5%
Average: 22.1%
Downloads: 44.3%
Maintainers (1)
Last synced: 6 months ago

Dependencies

requirements.txt pypi
  • matplotlib *
  • numpy *
  • pandas *
  • pyDataFitting *
  • scikit-learn *
  • scipy *
  • tqdm *
setup.py pypi
  • matplotlib *
  • numpy *
  • pandas *
  • scikit-learn *
  • scipy *
  • tqdm *
.github/workflows/main.yml actions
  • actions/checkout v2 composite
  • actions/setup-python v2 composite
  • codecov/codecov-action v2 composite
environment.yml conda
  • matplotlib
  • numpy
  • pandas
  • pip
  • scikit-learn
  • scipy
  • tqdm