https://github.com/2shakilrafi/goswami-code

https://github.com/2shakilrafi/goswami-code

Science Score: 13.0%

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    Low similarity (1.1%) to scientific vocabulary
Last synced: 9 months ago · JSON representation

Repository

Basic Info
  • Host: GitHub
  • Owner: 2shakilrafi
  • License: gpl-3.0
  • Language: Jupyter Notebook
  • Default Branch: main
  • Size: 10 MB
Statistics
  • Stars: 0
  • Watchers: 1
  • Forks: 0
  • Open Issues: 0
  • Releases: 0
Created almost 2 years ago · Last pushed almost 2 years ago
Metadata Files
Readme License

README.md

goswami-code

This repo contains preliminary code to demonstrate my proof of concept proposal of using a combination of variational autoencoders and TabNet for genomic analysis

Owner

  • Name: Shakil Ahmed Rafi
  • Login: 2shakilrafi
  • Kind: user
  • Location: Arkansas, USA
  • Company: University of Arkansas

I am currently a PhD candidate in Pure Mathematics at the University of Arkansas. My research areas are in PDEs and the use of Artificial Neural Networks.

GitHub Events

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Dependencies

requirements.txt pypi
  • Jinja2 ==3.1.4
  • Markdown ==3.6
  • MarkupSafe ==2.1.5
  • Werkzeug ==3.0.3
  • absl-py ==2.1.0
  • astunparse ==1.6.3
  • certifi ==2024.7.4
  • charset-normalizer ==3.3.2
  • contourpy ==1.2.1
  • cycler ==0.12.1
  • filelock ==3.15.4
  • flatbuffers ==24.3.25
  • fonttools ==4.53.1
  • fsspec ==2024.6.1
  • gast ==0.6.0
  • google-pasta ==0.2.0
  • grpcio ==1.65.1
  • gseapy ==1.1.3
  • h5py ==3.11.0
  • idna ==3.7
  • joblib ==1.4.2
  • keras ==3.4.1
  • kiwisolver ==1.4.5
  • libclang ==18.1.1
  • markdown-it-py ==3.0.0
  • matplotlib ==3.9.1
  • mdurl ==0.1.2
  • ml-dtypes ==0.4.0
  • mpmath ==1.3.0
  • namex ==0.0.8
  • networkx ==3.3
  • numpy ==1.26.4
  • opt-einsum ==3.3.0
  • optree ==0.12.1
  • pandas ==2.2.2
  • pillow ==10.4.0
  • protobuf ==4.25.4
  • pyparsing ==3.1.2
  • pytz ==2024.1
  • requests ==2.32.3
  • rich ==13.7.1
  • scikit-learn ==1.5.1
  • scipy ==1.14.0
  • seaborn ==0.13.2
  • setuptools ==69.5.1
  • sympy ==1.13.1
  • tensorboard ==2.17.0
  • tensorboard-data-server ==0.7.2
  • tensorflow ==2.17.0
  • termcolor ==2.4.0
  • threadpoolctl ==3.5.0
  • torch ==2.4.0
  • tzdata ==2024.1
  • urllib3 ==2.2.2
  • wheel ==0.43.0
  • wrapt ==1.16.0