https://github.com/petermakus/seismic
SeisMIC is a python software suite to monitor phase velocity changes in time and space in seismology using ambient noise.
Science Score: 39.0%
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✓DOI references
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○Scientific vocabulary similarity
Low similarity (17.5%) to scientific vocabulary
Keywords
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Repository
SeisMIC is a python software suite to monitor phase velocity changes in time and space in seismology using ambient noise.
Basic Info
- Host: GitHub
- Owner: PeterMakus
- License: eupl-1.2
- Language: Python
- Default Branch: main
- Homepage: https://petermakus.github.io/SeisMIC/
- Size: 79.4 MB
Statistics
- Stars: 70
- Watchers: 4
- Forks: 17
- Open Issues: 6
- Releases: 5
Topics
Metadata Files
README.md
Monitoring Velocity Changes using Ambient Seismic Noise
SeisMIC (Seismological Monitoring using Interferometric Concepts) is a python software that emerged from the miic library. SeisMIC provides functionality to apply some concepts of seismic interferometry to different data of elastic waves. Its main use case is the monitoring of temporal changes in a mediums Green's Function (i.e., monitoring of temporal velocity changes).
SeisMIC will handle the whole workflow to create velocity-change time-series including: + Downloading raw data + Adaptable preprocessing of the waveform data + Computating cross- and/or autocorrelations + Plotting tools for correlations + Database management of ambient seismic noise correlations + Adaptable postprocessing of correlations + Computation of velocity change (dv/v) time series + Postprocessing of dv/v time series + Plotting of dv/v time-series + Inverting dv/v onto a spatial grid
SeisMIC handles correlations and data in an ObsPy-like manner.
Installation of this package
Installation from PyPi (pip install)
SeisMIC is now deployed on PyPi and can simply be installed using:
```bash
We recommend installing mpi4py from the conda-forge channel instead of PyPi
conda install -c conda-forge mpi4py
pip install seismic
If you want to execute the tutorials, you will have to install jupyter as well
pip install jupyter ```
Installation from Source Code
To obtain the lates features, you can install SeisMIC from its source code, available on GitHub.
Developers should download the dev branch
Download this package via GitHub and install it via bash terminal (the few steps shown below) or using the graphical user interface
```bash
Download via wget or web-browser
wget https://github.com/PeterMakus/SeisMIC/archive/refs/heads/main.zip
For developers download the dev branch
wget https://github.com/PeterMakus/SeisMIC/archive/refs/heads/dev.zip
unzip the package
unzip main.zip # or dev.zip
Change directory to the same directory that this repo is in (i.e., same directory as setup.py)
cd SeisMIC-main # That's the standard name the folder should have
Create the conda environment and install dependencies
conda install -c conda-forge mpi4py conda env create -f environment.yml
Activate the conda environment
conda activate seismic
Install the package in editable mode
pip install -e .
If you want to execute the tutorials, you will have to install jupyter as well
pip install jupyter ```
Getting started
Access SeisMIC's documentation here.
SeisMIC comes with a few tutorials (Jupyter notebooks). You can find those in the examples/ directory.
Acknowledging the Use of SeisMIC in your Work
If you should use SeisMIC to create published scientific content please cite the SeisMIC paper: Makus, P., & Sens-Schönfelder, C. (2024). SeisMIC-an Open Source Python Toolset to Compute Velocity Changes from Ambient Seismic Noise..
Reporting Bugs / Contact the developers
This version is an early release. If you encounter any issues or unexpected behaviour, please open an issue here on GitHub.
Questions?
If you have any questions that do not require any changes in the source code, please use the discussions feature
Contributing
Thank you for contributing to SeisMIC! Have a look at our guidelines for contributors
Owner
- Name: Peter Makus
- Login: PeterMakus
- Kind: user
- Location: Potsdam
- Company: GFZ Potsdam
- Twitter: PeterMakus1
- Repositories: 1
- Profile: https://github.com/PeterMakus
Seismology PhD student at GFZ Potsdam
GitHub Events
Total
- Create event: 3
- Release event: 1
- Issues event: 23
- Watch event: 17
- Member event: 1
- Issue comment event: 35
- Push event: 55
- Pull request event: 7
- Fork event: 5
Last Year
- Create event: 3
- Release event: 1
- Issues event: 23
- Watch event: 17
- Member event: 1
- Issue comment event: 35
- Push event: 55
- Pull request event: 7
- Fork event: 5
Committers
Last synced: about 2 years ago
Top Committers
| Name | Commits | |
|---|---|---|
| Peter Makus | m****s@g****e | 551 |
| PeterMakus | p****s@g****e | 193 |
| Christoph Sens-Schönfelder | c****s@g****e | 15 |
| Peter Makus | 4****s | 4 |
| dependabot[bot] | 4****] | 2 |
Committer Domains (Top 20 + Academic)
Issues and Pull Requests
Last synced: 6 months ago
All Time
- Total issues: 27
- Total pull requests: 61
- Average time to close issues: 19 days
- Average time to close pull requests: 1 day
- Total issue authors: 10
- Total pull request authors: 3
- Average comments per issue: 3.11
- Average comments per pull request: 0.33
- Merged pull requests: 56
- Bot issues: 0
- Bot pull requests: 6
Past Year
- Issues: 17
- Pull requests: 6
- Average time to close issues: 17 days
- Average time to close pull requests: about 6 hours
- Issue authors: 7
- Pull request authors: 2
- Average comments per issue: 2.12
- Average comments per pull request: 0.17
- Merged pull requests: 6
- Bot issues: 0
- Bot pull requests: 0
Top Authors
Issue Authors
- PeterMakus (13)
- imme-w (4)
- jojomale (3)
- cheshire2cat (2)
- wgajek (1)
- amell567 (1)
- Yuuki-yuuki (1)
- mcardenass (1)
- avuan (1)
- geothomaslee (1)
Pull Request Authors
- PeterMakus (58)
- dependabot[bot] (6)
- jojomale (2)
Top Labels
Issue Labels
Pull Request Labels
Packages
- Total packages: 1
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Total downloads:
- pypi 1,227 last-month
- Total dependent packages: 0
- Total dependent repositories: 0
- Total versions: 6
- Total maintainers: 1
pypi.org: seismic
Seismological Monitoring using Interferometric Concepts
- Homepage: https://github.com/PeterMakus/SeisMIC
- Documentation: https://petermakus.github.io/SeisMIC/index.html
- License: European Union Public Licence 1.2 (EUPL 1.2)
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Latest release: 0.6.19
published 7 months ago
Rankings
Maintainers (1)
Dependencies
- pydata-sphinx-theme *
- sphinx *
- sphinx-copybutton *
- sphinxcontrib-mermaid *
- flake8 *
- geographiclib *
- h5py *
- matplotlib *
- numpy *
- obspy >=1.3
- pip *
- prov *
- py *
- pydata-sphinx-theme *
- pytest *
- pyyaml *
- scipy *
- sphinx-copybutton *
- sphinxcontrib-mermaid *
- tqdm *