https://github.com/pycroscopy/pycroscopy
Scientific analysis of nanoscale materials imaging data
Science Score: 46.0%
This score indicates how likely this project is to be science-related based on various indicators:
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○CITATION.cff file
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✓codemeta.json file
Found codemeta.json file -
✓.zenodo.json file
Found .zenodo.json file -
○DOI references
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✓Academic publication links
Links to: arxiv.org, zenodo.org -
✓Committers with academic emails
13 of 33 committers (39.4%) from academic institutions -
○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (11.4%) to scientific vocabulary
Keywords
afm
atom
atomic-force-microscopy
electron-microscopy
fft
imaging
infrared
machine-learning
materials-science
microscopy
raman
scanning
scanning-probe-microscopy
scanning-tunnelling-microscopy
signal-processing
spectroscopy
statistics
stem
stm
visualization
Keywords from Contributors
version
Last synced: 5 months ago
·
JSON representation
Repository
Scientific analysis of nanoscale materials imaging data
Basic Info
- Host: GitHub
- Owner: pycroscopy
- License: mit
- Language: Jupyter Notebook
- Default Branch: main
- Homepage: https://pycroscopy.github.io/pycroscopy/about.html
- Size: 357 MB
Statistics
- Stars: 269
- Watchers: 30
- Forks: 74
- Open Issues: 50
- Releases: 36
Topics
afm
atom
atomic-force-microscopy
electron-microscopy
fft
imaging
infrared
machine-learning
materials-science
microscopy
raman
scanning
scanning-probe-microscopy
scanning-tunnelling-microscopy
signal-processing
spectroscopy
statistics
stem
stm
visualization
Created over 9 years ago
· Last pushed 6 months ago
Metadata Files
Readme
License
README.md
pycroscopy
pycroscopy is a Python package for generic (domain-agnostic) microscopy data analysis. More specialized or domain-specific analysis routines are contained within some of the other packages within the pycroscopy ecosystem.
Please visit our homepage for more information and installation instructions.
If you use pycroscopy for research, we would appreciate if you could cite our Arxiv paper titled "USID and Pycroscopy - Open frameworks for storing and analyzing spectroscopic and imaging data".
Examples:
Intro to pycroscopy -
Image inpainting -
Denoising with Autoencoders -
More examples in the jupyter_notebooks folder.
List of Workshops Held
2024
2023
2022
2021
2020
2019
2018
Owner
- Name: pycroscopy
- Login: pycroscopy
- Kind: organization
- Email: pycroscopy@gmail.com
- Website: https://pycroscopy.github.io/pycroscopy/ecosystem.html
- Repositories: 17
- Profile: https://github.com/pycroscopy
GitHub Events
Total
- Issues event: 1
- Watch event: 12
- Push event: 13
- Pull request event: 5
- Fork event: 3
- Create event: 1
Last Year
- Issues event: 1
- Watch event: 12
- Push event: 13
- Pull request event: 5
- Fork event: 3
- Create event: 1
Committers
Last synced: 9 months ago
Top Committers
| Name | Commits | |
|---|---|---|
| syz | s****s@o****v | 1,980 |
| Chris Smith | c****5@u****u | 998 |
| ramav87 | r****7@g****m | 146 |
| syz | s****z@o****v | 114 |
| Rama Vasudevan | v****k@o****v | 43 |
| nlaanait | n****t@g****m | 33 |
| Maxim Ziatdinov | z****x@g****m | 27 |
| Raj | r****i@u****u | 26 |
| Mani | v****i@g****m | 25 |
| Carlo | c****i | 22 |
| str-eat | d****e@o****m | 18 |
| Gerd Duscher | 5****r | 18 |
| liambcollins@gmail.com | C****t | 15 |
| Unknown | a****t@g****m | 13 |
| Unknown | o****k@g****m | 12 |
| Jessica Kong | j****g@g****m | 12 |
| Enrique A. Lopez-Guerra | e****z@g****u | 12 |
| Patrik Marschalik | m****k@f****g | 11 |
| Rama Vasudevan | r****v@o****v | 8 |
| Liambcollins | l****s@g****m | 8 |
| Utkarshp1161 | u****1@g****m | 8 |
| ealopez | e****z@g****u | 7 |
| kamyar | i****r@g****m | 2 |
| Streater | d****r@n****m | 2 |
| Tommaso Costanzo | c****t@c****u | 2 |
| root | k****j@b****g | 2 |
| unknown | A****r@M****V | 2 |
| zhangxinqiao314 | 1****4 | 1 |
| Kevin Tee | a****t@p****m | 1 |
| Magnus Nord | M****d@g****k | 1 |
| and 3 more... | ||
Committer Domains (Top 20 + Academic)
ornl.gov: 4
nist.gov: 1
berkeley.edu: 1
glasgow.ac.uk: 1
minint-ak93aol.ornl.gov: 1
bitbucket.org: 1
cmich.edu: 1
nrconsults.com: 1
gwmail.gwu.edu: 1
fhi-berlin.mpg: 1
gwu.edu: 1
uw.edu: 1
utk.edu: 1
Issues and Pull Requests
Last synced: 6 months ago
All Time
- Total issues: 45
- Total pull requests: 68
- Average time to close issues: 5 months
- Average time to close pull requests: 29 days
- Total issue authors: 22
- Total pull request authors: 18
- Average comments per issue: 2.62
- Average comments per pull request: 0.35
- Merged pull requests: 63
- Bot issues: 0
- Bot pull requests: 0
Past Year
- Issues: 1
- Pull requests: 1
- Average time to close issues: N/A
- Average time to close pull requests: about 2 hours
- Issue authors: 1
- Pull request authors: 1
- Average comments per issue: 0.0
- Average comments per pull request: 0.0
- Merged pull requests: 1
- Bot issues: 0
- Bot pull requests: 0
Top Authors
Issue Authors
- ramav87 (14)
- ssomnath (9)
- ziatdinovmax (2)
- sulaymandesai (2)
- slps9061008 (1)
- nccreang (1)
- zhangxinqiao314 (1)
- dxm447 (1)
- stefanv (1)
- DancingQuanta (1)
- ayfliu (1)
- luv2python (1)
- rajgiriUW (1)
- darssita2017 (1)
- alex-treebeard (1)
Pull Request Authors
- ramav87 (17)
- ssomnath (16)
- gduscher (8)
- utkarshp1161 (6)
- kongjy (4)
- saimani5 (4)
- ziatdinovmax (4)
- rajgiriUW (3)
- TommasoCostanzo (2)
- Kamyar-V2 (2)
- Liambcollins (2)
- kevinsmia1939 (1)
- donpatrice (1)
- str-eat (1)
- ajinkya-kulkarni (1)
Top Labels
Issue Labels
enhancement (5)
help wanted (3)
bug (3)
question (2)
good first issue (1)
Pull Request Labels
enhancement (2)
bug (1)
Packages
- Total packages: 2
-
Total downloads:
- pypi 621 last-month
-
Total dependent packages: 2
(may contain duplicates) -
Total dependent repositories: 1
(may contain duplicates) - Total versions: 98
- Total maintainers: 2
pypi.org: pycroscopy
Python library for scientific analysis of microscopy data
- Homepage: https://pycroscopy.github.io/pycroscopy/about.html
- Documentation: https://pycroscopy.readthedocs.io/
- License: MIT
-
Latest release: 0.63.3
published over 1 year ago
Rankings
Dependent packages count: 3.2%
Stargazers count: 4.2%
Forks count: 5.2%
Average: 9.4%
Downloads: 12.8%
Dependent repos count: 21.6%
Last synced:
6 months ago
conda-forge.org: pycroscopy
pycroscopy is a python package for analysis of nanoscale imaging data
- Homepage: https://github.com/pycroscopy/pycroscopy
- License: MIT
-
Latest release: 0.62.0
published over 3 years ago
Rankings
Forks count: 21.4%
Stargazers count: 24.3%
Average: 32.7%
Dependent repos count: 34.0%
Dependent packages count: 51.2%
Last synced:
6 months ago
Dependencies
docs/requirements.txt
pypi
- numpydoc *
.github/workflows/actions.yml
actions
- actions/checkout v2 composite
- actions/setup-python v2 composite
- codecov/codecov-action v3 composite
- crazy-max/ghaction-github-pages v2 composite
setup.py
pypi