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Recent Releases of https://github.com/usnistgov/fipy

https://github.com/usnistgov/fipy - 3.4.5: Maintenance Release

What's Changed

  • Migrate pkg_resources to importlib by @guyer in https://github.com/usnistgov/fipy/pull/945
  • Fix sign error in documentation of Robin condition by @guyer in https://github.com/usnistgov/fipy/pull/968
  • Environment pinning by @guyer in https://github.com/usnistgov/fipy/pull/985
  • Change default coefficient of ImplicitSourceTerm to 1 by @guyer in https://github.com/usnistgov/fipy/pull/984
  • Fix inclusion of environments/README.rst by @guyer in https://github.com/usnistgov/fipy/pull/988
  • Tweak documentation by @guyer in https://github.com/usnistgov/fipy/pull/991
  • Log much more information about FiPy environment by @guyer in https://github.com/usnistgov/fipy/pull/990
  • Introduce Timer context manager by @guyer in https://github.com/usnistgov/fipy/pull/995
  • Issue1000 examples.diffusion.mesh1D constrains a gradient but calls it a flux by @guyer in https://github.com/usnistgov/fipy/pull/1001
  • Convert integer to string in operator variable represenation by @guyer in https://github.com/usnistgov/fipy/pull/1013
  • switch nix recipe to flake by @wd15 in https://github.com/usnistgov/fipy/pull/992
  • Fix explanation for no-flux steady-state failure by @guyer in https://github.com/usnistgov/fipy/pull/1015
  • Fixes for Python 3.12, NumPy 2.0, and SciPy 1.14 by @guyer in https://github.com/usnistgov/fipy/pull/1050

Curated Changelog: https://github.com/usnistgov/fipy/blob/3.4.5/CHANGELOG.rst

Full Changelog: https://github.com/usnistgov/fipy/compare/3.4.4...3.4.5

- Python
Published by guyer over 1 year ago

https://github.com/usnistgov/fipy - 3.4.4: Maintenance Release

This maintenance release adds Logging and resolves compatibility issues with recent builds of PETSc and NumPy.

What's Changed

  • Discourage StackOverflow by @guyer in https://github.com/usnistgov/fipy/pull/876
  • Add Logging by @guyer in https://github.com/usnistgov/fipy/pull/875
  • Add tests for the Nix build by @wd15 in https://github.com/usnistgov/fipy/pull/791
  • Manually clean up PETSc objects by @guyer in https://github.com/usnistgov/fipy/pull/899
  • Get CI working again by @guyer in https://github.com/usnistgov/fipy/pull/925
  • Fix numpy 1.25 issues by @guyer in https://github.com/usnistgov/fipy/pull/930

Curated Changelog: https://github.com/usnistgov/fipy/blob/3.4.4/CHANGELOG.rst

Full Changelog: https://github.com/usnistgov/fipy/compare/3.4.3...3.4.4

- Python
Published by guyer over 2 years ago

https://github.com/usnistgov/fipy - 3.4.3: Maintenance release

This maintenance release adds a new example contributed by @Jon83Carvalho, clarifies many points in the documentation, migrates all CI to Azure, updates to using wheels for distribution, and substantially refactors matrices to work more consistently across solvers.

What's Changed

  • Debug CI failures by @guyer in https://github.com/usnistgov/fipy/pull/749
  • Stokes Cavity - non-newtonian by @Jon83Carvalho in https://github.com/usnistgov/fipy/pull/748
  • Disable TVTK tests if its prerequisites aren't met by @guyer in https://github.com/usnistgov/fipy/pull/764
  • Tabulate versions of FiPy dependencies when tests are run by @guyer in https://github.com/usnistgov/fipy/pull/763
  • Refactor matrices by @guyer in https://github.com/usnistgov/fipy/pull/721
  • Raise ImportError before trying to unpack solvers by @guyer in https://github.com/usnistgov/fipy/pull/768
  • Introduce SharedTemporaryFile (bis) by @guyer in https://github.com/usnistgov/fipy/pull/769
  • Get website documentation to display math by @guyer in https://github.com/usnistgov/fipy/pull/773
  • Add future package to Binder environment by @guyer in https://github.com/usnistgov/fipy/pull/779
  • Document parallel gmsh by @guyer in https://github.com/usnistgov/fipy/pull/793
  • Remove future from setup.py and _setup commands by @guyer in https://github.com/usnistgov/fipy/pull/785
  • Fix broken circleSquare with newer Gmsh by @guyer in https://github.com/usnistgov/fipy/pull/794
  • Move trilinos tests to Py3k by @guyer in https://github.com/usnistgov/fipy/pull/797
  • Replace deprecated numpy types by @guyer in https://github.com/usnistgov/fipy/pull/798
  • Fix Python 2.7 conda environment by @wd15 in https://github.com/usnistgov/fipy/pull/795
  • Speed up conda environment creation by @guyer in https://github.com/usnistgov/fipy/pull/804
  • Fix python 3.9 represenation of abs by @guyer in https://github.com/usnistgov/fipy/pull/812
  • Set up CI with Azure Pipelines by @guyer in https://github.com/usnistgov/fipy/pull/822
  • fix: stop divide by zero warning in LU solvers by @wd15 in https://github.com/usnistgov/fipy/pull/790
  • Change colorbar argument to valid value by @guyer in https://github.com/usnistgov/fipy/pull/829
  • Get gmsh version from stderr or stdout by @guyer in https://github.com/usnistgov/fipy/pull/846
  • Collect contact information on single page by @guyer in https://github.com/usnistgov/fipy/pull/847
  • Debug CIs by @guyer in https://github.com/usnistgov/fipy/pull/848
  • Refine azure runs by @guyer in https://github.com/usnistgov/fipy/pull/851
  • Issue858 pysparse ci failure by @guyer in https://github.com/usnistgov/fipy/pull/859
  • Fix missing Qt on headless CI by @guyer in https://github.com/usnistgov/fipy/pull/864
  • Update CI documentation to refer only to Azure by @guyer in https://github.com/usnistgov/fipy/pull/863
  • Shift CI from eggs to wheels by @guyer in https://github.com/usnistgov/fipy/pull/860
  • Document the things by @guyer in https://github.com/usnistgov/fipy/pull/866
  • Document viewer attributes by @guyer in https://github.com/usnistgov/fipy/pull/867
  • Define _localNonOverlappingFaceIDs for Gmsh by @guyer in https://github.com/usnistgov/fipy/pull/857
  • Update changelog by @guyer in https://github.com/usnistgov/fipy/pull/871

New Contributors

  • @Jon83Carvalho made their first contribution in https://github.com/usnistgov/fipy/pull/748

Curated Changelog: https://github.com/usnistgov/fipy/blob/3.4.3/CHANGELOG.rst

Full Changelog: https://github.com/usnistgov/fipy/compare/3.4.2.1...3.4.3

- Python
Published by guyer over 3 years ago

https://github.com/usnistgov/fipy - Moved mailing list

This release fixes assorted viewer issues, fixes a problem with convection boundary conditions, and introduces spherical meshes.

- Python
Published by guyer over 5 years ago

https://github.com/usnistgov/fipy - Support numpy 1.18

- Python
Published by guyer about 6 years ago

https://github.com/usnistgov/fipy - Support PETSc

This release adds support for the PETSc solvers for solving in parallel.

Pulls

  • Add support for PETSc solvers (#701)
  • Assorted fixes while supporting PETSc (#700)
    • Fix print statements for Py3k
    • Resolve Gmsh issues
    • Dump only on processor 0
    • Only write timetests on processor 0
    • Fix conda-forge link
    • Upload PDF
    • Document print option of FIPY_DISPLAY_MATRIX
    • Use legacy numpy formatting when testing individual modules
    • Switch to matplotlib's built-in symlog scaling
    • Clean up tests
  • Assorted fixes for benchmark 8 (#699)
    • Stipulate --force option for conda remove fipy
    • Update Miniconda installation url
    • Replace _CellVolumeAverageVariable class with Variable expression
    • Fix output for bad call stack
  • Make CircleCI build docs on Py3k (#698)
  • Fix link to Nick Croft's thesis (#681)
  • Fix NIST header footer (#680)
  • Use Nixpkgs version of FiPy expression (#661)
  • Update the Nix recipe (#658)

Fixes

  • #692: Can't copy example scripts with the command line
  • #669: input() deadlock on parallel runs
  • #643: Automate release process

- Python
Published by guyer about 6 years ago

https://github.com/usnistgov/fipy - Py3k

This release brings support for Python 2 and Python 3 from the same source, without any translation. Thanks to @pya and @woodscn for getting things started.

Pulls

  • Automate spell check (#657)
  • Fix gmsh on windows (#648)
  • Fix sphinx documentation (#647)
  • Migrate to Py3k (#645)
  • gmshMesh.py compatibility with Gmsh > 3.0.6 (#644) Thanks to @xfong.

Fixes

  • #655: When Python 2 and 3 are installed, Mayavi wont work. Thanks to @Hendrik410.
  • #646: Deprecate develop branch
  • #643: Automate release process
  • #601: contents.rst and manual.rst are a recursive mess
  • #597: Use GitHub link for the compressed archive in documentation
  • #557: faceGradAverage is stupid
  • #552: documentation integration
  • #458: Documentation wrong for precedence of Lx and dx for NonUniformGrids
  • #457: Special methods are not included in Sphinx documentation
  • #432: Python 3 issues
  • #340: Don't upload packages to PyPi, just add the master url

- Python
Published by guyer over 6 years ago

https://github.com/usnistgov/fipy - 3.2

DevOps release conda-forge and CIs

- Python
Published by guyer over 6 years ago

https://github.com/usnistgov/fipy - version-1_0

No changelog for this release.

- Python
Published by guyer over 7 years ago

https://github.com/usnistgov/fipy - version-0_1

No changelog for this release.

- Python
Published by guyer over 7 years ago

https://github.com/usnistgov/fipy - version-1_1

No changelog for this release.

- Python
Published by guyer over 7 years ago

https://github.com/usnistgov/fipy - version-0_1_1

No changelog for this release.

- Python
Published by guyer over 7 years ago

https://github.com/usnistgov/fipy - version-1_2_3

No changelog for this release.

- Python
Published by guyer over 7 years ago

https://github.com/usnistgov/fipy - version-1_2_1

No changelog for this release.

- Python
Published by guyer over 7 years ago

https://github.com/usnistgov/fipy - version-1_2

No changelog for this release.

- Python
Published by guyer over 7 years ago

https://github.com/usnistgov/fipy - version-1_2_2

No changelog for this release.

- Python
Published by guyer over 7 years ago

https://github.com/usnistgov/fipy - removed-scipy-solvers

No changelog for this release.

- Python
Published by guyer over 7 years ago

https://github.com/usnistgov/fipy - version-2_1

No changelog for this release.

- Python
Published by guyer over 7 years ago

https://github.com/usnistgov/fipy - version-2_0

No changelog for this release.

- Python
Published by guyer over 7 years ago

https://github.com/usnistgov/fipy - version-2_0_3

No changelog for this release.

- Python
Published by guyer over 7 years ago

https://github.com/usnistgov/fipy - version-2_0_2

No changelog for this release.

- Python
Published by guyer over 7 years ago

https://github.com/usnistgov/fipy - version-2_0_1

No changelog for this release.

- Python
Published by guyer over 7 years ago

https://github.com/usnistgov/fipy - version-2_1_3

No changelog for this release.

- Python
Published by guyer over 7 years ago

https://github.com/usnistgov/fipy - version-2_1_2

No changelog for this release.

- Python
Published by guyer over 7 years ago

https://github.com/usnistgov/fipy - version-2_1_1

No changelog for this release.

- Python
Published by guyer over 7 years ago

https://github.com/usnistgov/fipy - version-3_1

No changelog for this release.

- Python
Published by guyer over 7 years ago

https://github.com/usnistgov/fipy - version-3_0

No changelog for this release.

- Python
Published by guyer over 7 years ago

https://github.com/usnistgov/fipy - version-3_0_1

No changelog for this release.

- Python
Published by guyer over 7 years ago

https://github.com/usnistgov/fipy - version-3_1_1

  • [closed] GMSH version >= 2.10 incorrectly read by gmshMesh.py #462
  • [closed] setup.py gist warning #455
  • [bug][viewers] DendriteViewer puts contours over color bar #445
  • [bug][viewers] MatplotlibViewer still has problems in IPython notebook #443
  • [closed] Use github API to get nicely formatted list of issues #440
  • [closed] Failed tests on Mac OS X #438
  • [examples] Figure misleading in examples.cahnHilliard.mesh2DCoupled #437
  • [bug][documentation][installation] Links to prerequisites are broken #433
  • [closed] Make devlop the default branch on Github #430
  • [bug][viewers] MatplotlibViewer don't display #427
  • [bug][documentation] Links for Warren and Guyer are broken on the web page #425
  • [bug][viewers] The "limits" argument for Matplotlib2DGridViewer does not function #421
  • [enhancement] Updates to reflect move to Github #416
  • [bug][viewers] MatplotlibGrid2DViewer error with Matplotlib version 1.4.0 #415
  • [enhancement][meshes] Implement PeriodicGrid3D #408
  • [boundaryConditions][bug][invalid] FiPy self-test fails #405
  • [bug][installation] package never gets uploaded to PyPI #404
  • [boundaryConditions][bug] both insight and internal #403
  • [boundaryConditions][bug] do n't have to take a look overly far #402
  • [boundaryConditions][bug] Vector equations are broken when sweep is used instead of solve. #401
  • [documentation][task] Home page needs out-of-NIST redirects #398
  • [documentation][duplicate][enhancement] Switch to sphinxcontrib-bibtex #397
  • [documentation][enhancement] enable google analytics #396
  • [bug][documentation] Documentation change for Ubuntu install #395
  • [bug][meshes] CylindricalNonUniformGrid2D doesn't make a FaceVariable for exteriorFaces #393
  • [bug][documentation] exit_nist.cgi deprecated #392
  • [bug][documentation] Peclet inequalities have the wrong sign #391
  • [bug][invalid] test ticket #389
  • [bug][numerix] Windows 64 and numpy's dtype=int #388
  • [enhancement][viewers] Add support for Matplotlib streamplot #384
  • [boundaryConditions][bug] Neumann boundary conditions not clearly documented #382
  • [boundaryConditions][bug] numpy 1.7.1 test failures with physicalField.py #381
  • [bug][terms] VanLeerConvectionTerm MinMod slope limiter is broken #377
  • [bug] testing CommitTicketUpdater #376
  • [bug][numerix] NumPy 1.7.0 doesn't have _formatInteger #375
  • [bug][numerix] Bug with numpy 1.7.0 #373
  • [bug][meshes] convection problem with cylindrical grid #372
  • [bug][examples] examples/phase/binary.py has problems #371
  • [bug][terms] FIPYDISPLAYMATRIX is broken #370
  • [bug][viewers] Viewers don't inline well in IPython notebook #368
  • [documentation][enhancement] Change documentation to promote use of stackoverflow #367
  • [bug][variables] unOps can't be pickled #366
  • [enhancement][parallel] Rename communicator instances #365
  • [bug][meshes] Parallel bug in non-uniform grids and conflicting mesh class and factory function names #364
  • [bug][invalid][meshes] Using Popen('gmsh ...', shell=True) rather than shell=False security danger #362
  • [bug][documentation] NIST CSS changed #360
  • [enhancement][variables][wontfix] constrain should return a handle to the constraint for later deletion #357
  • [bug][documentation] link to mailing list is wrong #356
  • [documentation][task] Update Ohloh to point at git repo #353
  • [bug] getVersion() fails on Py3k #352
  • [bug][meshes] Gmsh importer can't read mesh elements with no tags #350
  • [documentation][enhancement] Include mailing list activity frame on front page #347
  • [bug][examples] text in trunk/examples/convection/source.py is out of date #346
  • [bug][terms][wontfix] segfault on loki #344
  • [bug][terms][wontfix] multiplying equation by "x" changes the solution #343
  • [bug][terms] sign issues for equation with transient, convection and implicit terms #342
  • [bug] Fix for test failures on loki #339
  • [bug][documentation] SvnToGit clean up #338
  • [enhancement][installation] Clean up interaction between dependencies and installation process #337
  • [documentation][enhancement] Make the citation links go to the DOI links #334
  • [bug][documentation] Web page links seem to be broken #333
  • [bug][tests] Inline failure on Ubuntu x86_64 #332
  • [bug] Assorted errors #331
  • [--inline][bug] faceValue as FaceCenters gives inline failures #330
  • [bug][meshes] Gmsh background mesh doesn't work in parallel #329
  • [bug][io] Gmsh2D does not respect background mesh #326
  • [documentation][enhancement] constraining values with ImplictSourceTerm not documented? #324
  • [bug][meshes] getFaceCenters() should return a FaceVariable #323
  • [bug][terms] Explicit convetion terms should fail when the equation has no TransientTerm (dt=None) #319
  • [bug][solvers] FiPy will not importy #318
  • [bug][meshes] gmshImport tests fail on Windows due to shared file #317
  • [--inline][bug] changes to gmshImport.py caused --inline problems #316
  • [bug][io] Gmsh I/O #313
  • [enhancement] LSMLIB refactor #311
  • [bug][tests] Failures on sandbox under buildbot #307
  • [task][tests] Add in parallel buildbot testing on more than 2 processors #306
  • [bug][parallel] cellVariable.min() broken in parallel #302
  • [bug][installation] Epetra.PyComm() broken on Debian #301
  • [bug][examples] examples/cahnHilliard/mesh2D.py broken with -- trilinos #300
  • [bug] Viewers not working when plotting meshes with zero cells in parallel #299
  • [bug][meshes] Memory consumption growth with repeated meshing, especially with Gmsh #298
  • [deprecations][task] Remove deprecated gist and gnuplot support #297
  • [task][tests][wontfix] Windows for release 3.0 #296
  • [bug] Gmsh version must be >= 2.0 errors on zizou #295
  • [--inline][bug] --pysparse --inline failures #294
  • [--inline][bug] python examples/cahnHilliard/sphere.py --inline segfaults on OS X #293
  • [bug][solvers] two --scipy failures #292
  • [bug][tests] efficiency_test chokes on liquidVapor2D.py #291
  • [enhancement][tests] Improve test reporting to avoid inconsequential buildbot failures #290
  • [bug][tests] diffusionTerm._test() requires PySparse #289
  • [bug][viewers] gmsh importer and gmsh tests don't clean up after themselves #288
  • [documentation][task] move FiPy to distributed version control #287
  • [task] get running in Py3k #286
  • [deprecations][enhancement] remove deprecated viewers.make() #285
  • [deprecations][enhancement] remove deprecated Variable.transpose() #284
  • [deprecations][enhancement] remove deprecated getters and setters #282
  • [deprecations][enhancement] remove deprecated NthOrderDiffusionTerm #281
  • [deprecations][enhancement] remove deprecated diffusionTerm= argument to ConvectionTerm #280
  • [deprecations][enhancement] remove deprecated fipy.meshes.numMesh submodule #279
  • [deprecations][enhancement] remove deprecated forms of Gmsh meshes #278
  • [deprecations][enhancement] remove deprecated steps= from Solver #277
  • [bug][duplicate] mpirun -np 2 python setup.py test --no-pysparse hangs on bunter #275
  • [bug] Epetra Norm2 failure in parallel #274
  • [bug][terms] Make DiffusionTermNoCorrection the default #273
  • [bug][meshes] Error adding meshes #272
  • [bug][wontfix] examples/diffusion/anisotropy.py fails from base fipy directory #271
  • [bug][tests] tests take too long!!! #270
  • [bug] Rename GridXD #269
  • [task] Set up Zizou as a working slave #268
  • [enhancement] Reduce the run times for chemotaxis tests #267
  • [bug][parallel][wontfix] Exception on one process prevents tests from finishing #265
  • [bug][duplicate][parallel] HANG in parallel test of examples/chemotaxis/input2D.py on some configurations #264
  • [bug][invalid] Example mesh1D.py not working on ubuntu 11.04 #263
  • [bug] issue with solvers #262
  • [bug][meshes] GmshImport should read element colors #261
  • [bug][meshes] GmshImport should support all element types #260
  • [enhancement][meshes] Introduce mesh.x as shorthand for mesh.cellCenters[0] etc #259
  • [bug][meshes] GmshExport is not tested and does not work #258
  • [bug] Grid1D(dx=(1,2,3)) failure #256
  • [enhancement] Include Benny's improved interpolation patch #252
  • [bug] parallel is broken #251
  • [bug][documentation] TeX is wrong in examples.phase.quaternary #250
  • [bug] diffusionTerm(var=var1).solver(var=var0) should fail sensibly #247
  • [bug] Fix fipy.terms._BinaryTerm test failure in parallel #245
  • [bug][invalid] Remove self.var is self.var or self.var is None. #244
  • [bug] close out reconstrain branch #243
  • [bug] update documentation #242
  • [bug] Set Sandbox up as a working slave #241
  • [bug] Profile and merge reconstrain branch #240
  • [bug][tests] _BinaryTerm.var is not predictable #238
  • [bug][solvers] --Trilinos --no-pysparse uses PySparse?!? #237
  • [boundaryConditions][bug] anisotropic diffusion and constraints don't mix #236
  • [boundaryConditions][bug] changed constraints don't propagate #235
  • [bug] coupled convection-diffusion always treated as Upwind #233
  • [bug][viewers] Mayavi broken on windows becase it has no SIGHUP. #232
  • [bug] factoryMeshes.py not up to date with respect to keyword arguments #231
  • [bug][duplicate] factoryMeshes.py not up to date with respect to keyword arguments #230
  • [bug][invalid] review the inclusion of mpi4py in the stdeb #229
  • [bug] --pysparse configuration should never attempt MPI imports #228
  • [bug][viewers] MatplotlibViewer fails if backend doesn't support flush_events() #226
  • [bug] Windows interactive plotting mostly broken #225
  • [bug] 'matrices are not aligned' errors in example test suite #224
  • [bug] mesh in FiPy name space #223
  • [bug][meshes] Non-uniform Grid3D fails to add #222
  • [bug][meshes] Problem with fipy and gmsh #221
  • [bug][variables][wontfix] _FixedBCFaceGradVariable mangles FaceGrad, even with no boundary conditions #220
  • [bug] matforge css is hammer-headed #219
  • [bug][tests] Absence of enthought.tvtk causes test failures #218
  • [bug][meshes] Gmsh CellVariables can't be unpickled #217
  • [bug][viewers] Fresh FiPy gives "ImportError: No viewers found" #216
  • [enhancement][invalid][tests] parallel tests on bitten #214
  • [bug][installation] pypi is failing #213
  • [bug] add rhie chow correction term in stokes cavity example #209
  • [bug][viewers] gnuplot1d gives error on plot of facevariable #206
  • [bug][meshes] wrong cell to cell normal in periodic meshes #205
  • [bug][invalid][solvers] error with diffusion for periodic mesh and steady state #204
  • [bug][meshes] Give helpfull error on - or / of meshes #203
  • [bug][meshes] mesh manipulation of periodic meshes leads to errors #202
  • [bug][documentation] Use physical velocity in the manual/FAQ #201
  • [bug][documentation] FAQ gives bad guidance for anisotropic diffusion #200
  • [bug] dummy viewer results in "NotImplementedError: can't instantiate abstract base class" #199
  • [bug][meshes] bug problem with CylindricalGrid1D #198
  • [bug][installation] How to tell if parallel is configured properly? #197
  • [bug][solvers] PySparse won't import in Python 2.6.5 on Windows #196
  • [bug][terms] term multiplication changes result #195
  • [bug][viewers] FIPYDISPLAYMATRIX on empty matrix with large b-vector throws ValueError #194
  • [bug][viewers] FIPYDISPLAYMATRIX raises ImportError in FiPy 2.1 and trunk #193
  • [bug][viewers] FIPYDISPLAYMATRIX=terms raises TypeError in FiPy 2.1 and trunk #192
  • [bug][viewers] sphereDaemon.py missing in FiPy 2.1 and from trunk #191
  • [bug][viewers] 'matplotlib: list index out of range' when no title given, but only sometimes #190
  • [bug] SMTPSenderRefused: (553, '5.1.8 trac@matdl-osi.org... Domain of sender address trac@matdl-osi.org does not exist', u'"FiPy" trac@matdl-osi.org') #188
  • [bug][meshes] Concatenated Mesh garbled by dump.write/read #187
  • [enhancement][invalid] Testing spam filter... #186
  • [enhancement][invalid] Test ticket #185
  • [bug][meshes] gmshExport.exportAsMesh() doesn't work #184
  • [bug][solvers] FiPy2.0.2 LinearJORSolver.init calls Solver rather than PysparseSolver #183
  • [bug][variables] ~binOp doesn't work on branches/version-2_0 #182
  • [bug][duplicate][examples] navier stokes again #181
  • [bug] broken arithmetic face to cell distance calculations #180
  • [bug][installation] easy_install instructions for MacOSX are broken #179
  • [bug][duplicate] broken setuptools url with python 2.6 #178
  • [bug] broken setuptools url with python 2.6 #177
  • [bug][installation] Win32 distribution test error #176
  • [bug][meshes] Grid3D getFaceCenters incorrect when mesh is offset #175
  • [bug][variables] Variable doesn't implement __invert__ #170
  • [bug][documentation] The FiPy webpage seems to be broken on Internet Explorer #169
  • [bug][documentation][wontfix] PDF TOC doesn't go as deep when built on dogbert vs. benson #168
  • [documentation][duplicate][enhancement] example showing how to go from 1.2 to 2.0 #167
  • [documentation][task] Still references to VectorCell and VectorFace Variable in manual #166
  • [documentation][task] Edit the what's new section of the manual #165
  • [bug][terms] Default time steps should be infinite #163
  • [bug][numerix] remove ones and zeros from numerix.py #162
  • [bug][installation] get pysparse working with python 2.4 #161
  • [duplicate][enhancement][meshes] Grid class #160
  • [enhancement][invalid][tests] bitten build should show more detailed configuration info #158
  • [bug][tests] temp files on widows #157
  • [enhancement][viewers] update the mayavi viewer to use mayavi 2 #156
  • [enhancement][tests] fix some of the deprecation warnings appearing in the tests #155
  • [documentation][task] Update manuals #154
  • [documentation][task] Switch documentation to use :math: directive #153
  • [solvers]taskImplement SciPy solvers #152
  • [duplicate][enhancement][viewers] update mayavi viewer to use mayavi2 #151
  • [installation][task] PythonXY installation? #150
  • [task][viewers] Test viewers #149
  • [bug][solvers] SciPy 0.7.0 solver failures on Macs #148
  • [solvers][task] Disable CGS solver in pysparse #147
  • [bug][viewers] Viewer factory fails for rank-1 CellVariable #145
  • [--inline][bug] intermittent failure on examples/diffusion/explicit/mixedelement.py --inline #144
  • [documentation][task] Document syntax changes #143
  • [task][viewers] merge Viewers branch #142
  • [installation][task] enthought toolset? #141
  • [installation][task] easy_install fipy #140
  • [task][tests] Get a Windows Bitten build slave #139
  • [documentation][task] FAQ on boundary conditions #138
  • [documentation][task] Backport examples from manuscript #137
  • [documentation][task] Document anisotropic diffusion #136
  • [documentation][task] Trilinos documentation #135
  • [boundaryConditions][bug][invalid] Problem with coefficients and FixedFlux boundary condition #134
  • [bug][viewers] MatplotlibViewer doesn't properly report the supported file extensions #131
  • [enhancement][tests] tests should be run with fipy.tests() #130
  • [bug][variables] Trying to "solve" an integer CellVariable should raise an error #128
  • [bug][tests] Examples can be very fragile with respect to floating point #127
  • [bug][variables] Variable, float, integer #126
  • [bug][examples] Pickled test data embeds obsolete packages #125
  • [bug][variables] Can't pickle a binOp #124
  • [bug][numerix] numerix.dot doesn't support tensors #123
  • [bug] check argument types for meshes #122
  • [bug][examples] simpleTrenchSystem.py #121
  • [bug][duplicate][viewers] mayavi display problems #120
  • [bug] max is broken for Variables #119
  • [duplicate][task][variables] Automatically handle casting of Variable from int to float when necessary. #118
  • [documentation][enhancement] getFacesBottom, getFacesTop etc. lack clear description in the reference #117
  • [bug] Linux: failed test, TypeError: No array interface... in solve() #116
  • [bug][viewers] viewing 3D Cahn-Hilliard is broken #115
  • [bug][viewers][wontfix] memory leak in Gist2DViewer #114
  • [bug][installation] OS X (MacBook Pro; Intel) FiPy installation problems #113
  • [bug][duplicate][viewers] stokesCavity.py doesn't display properly with matplotlib #112
  • [bug][viewers] Can't display Grid2D variables with matplotlib on Linux #111
  • [bug][examples] "Numeric array value must be dimensionless" in ElPhF examples #110
  • [bug][variables] doctest of fipy.variables.variable.Variable.array #109
  • [bug][variables] numerix.array * FaceVariable is broken #108
  • [bug][viewers] Can't move matplotlib windows on Mac #107
  • [bug][meshes] Concatenation of Grid1D objects doesn't always work #106
  • [duplicate][enhancement][tests] useless broken array tests should be removed #105
  • [bug][viewers] Syntax error in MatplotlibVectorViewer._plot() #104
  • [bug][variables] subscriber()._markStale() AttributeError #103
  • [enhancement][viewers] viewer limits should just be set as arguments, rather than as a dict #102
  • [bug] matplotlib 1D viewer autoscales when a limit is set to 0 #101
  • [enhancement][tests] testing from the Windows dist using the ipython command line #100
  • [bug][viewers] Matplotlib2DGridViewer cannot update multiple views #99
  • [bug] Windows patch for some broken test cases #98
  • [bug][numerix] Windows does not seem to handle NaN correctly. #97
  • [bug][meshes] broken tests with version 2.0 of gmsh #96
  • [--inline][bug] attached code breaks with --inline #95
  • [bug][duplicate] --inline error for attached code #94
  • [bug][duplicate][examples] Broken examples #93
  • [task][viewers] Pygist is dead (it's official) #92
  • [examples][task] update the examples to use "from fipy import *" #91
  • [bug] bug in matplotlib 0.87.7: TypeError: only length-1 arrays can be converted to Python scalars. #90
  • [bug][viewers][wontfix] MayaviSurfactantViewer has empty regions on the interface #89
  • [enhancement][meshes][wontfix] Create wrapped Grid class for Grid1D, Grid2D and Grid3D. #87
  • [enhancement][meshes] Grids should take Lx, Ly, Lz arguments #86
  • [bug][models][wontfix] bug in surfactant and expandingCircle.py needs improvements #85
  • [bug][duplicate][tests] Test failures on Intel Mac #84
  • [bug][terms] ZeroDivisionError for CellTerm when calling getOld() on its coefficient #83
  • [bug][invalid] purged #82
  • [bug][invalid] purged #81
  • [task][tests] Windows - testing - idle -ipython #80
  • [enhancement][viewers] viewers.make() to viewers.Viewer() #79
  • [boundaryConditions][enhancement][invalid] boundary conditions should reshape the value argument if it is a cell or face variable #78
  • [enhancement][variables] CellVariable hasOld() should set self.old #77
  • [bug] solve() and sweep() accept dt=CellVariable #76
  • [bug] installation of fipy shoould auto include REAMDE as a docstring #75
  • [bug][terms] Some combinations of DiffusionTerm and ConvectionTerm do not work #74
  • [bug] needless rebuilding of variables #72
  • [[general]][invalid] purged #71
  • [[general]][invalid] purged #70
  • [bug][invalid] purged #69
  • [bug][invalid] purged #68
  • [enhancement][viewers] Mesh viewing and unstructured data. #67
  • [bug] PDF rendering issues for the guide on various palforms #66
  • [--inline][bug][invalid] purged #65
  • [--inline][bug][invalid] purged #64
  • [enhancement][wontfix] Incorporate Spherical Coordinates in FiPy #63
  • [bug] fipy guide pdf bug: "an unrecognised token 13c was found" #62
  • [examples][task] Move 'ImplicitDiffusionTerm().solve(var) == 0' "failure" from examples.phase.simple to examples.diffusion.mesh1D? #61
  • [bug][wontfix] Update Mayavi viewers to use TVTK #60
  • [bug][wontfix] --cache failure in examples.phase.binary #59
  • [bug][wontfix] superfill mayavi viewer leaves gaps on the interface #58
  • [bug][documentation][wontfix] hacked epdoc-generated api.tex doesn't compile #57
  • [bug][wontfix] allclose() broken in various ways for variables #56
  • [bug] Error for internal BCs #55
  • [bug][tests] python setup.py test fails #54
  • [bug][wontfix] Gist2DViewer broken on x86_64 architectues #53
  • [closed] FaceVariable * FaceVectorVariable memory #52
  • [bug] pos doesn't work for terms #51
  • [bug][examples] Broken examples #50
  • [closed] Documentation for many ConvectionTerms is wrong #49
  • [closed] Documentation is not inherited from &hidden& classes #48
  • [closed] Terms should throw an error on bad coeff type #47
  • [boundaryConditions][bug] Variable needs to consider boundary conditions #46
  • [enhancement][variables] Slicing a vector Variable should produce a scalar Variable #45
  • [enhancement][examples] Navier Stokes #44
  • [bug][viewers] TSVViewer doesn't always get the right shape for the var #43
  • [bug] fipy.models.phase.phase.addOverFacesVariable is gross #42
  • [enhancement] EFFICIENCY.txt example fails to make viewer #41
  • [tests] broken levelset test case #40
  • [bug] matplotlib broken on mac with version 0.72.1 #39
  • [closed] multiple BCs on one face broken? #38
  • [closed] Better support for periodic boundary conditions #37
  • [closed] Gnuplot doesn't display the electroChem problem on windows. #36
  • [closed] gmsh write problemon windows #35
  • [bug][numerix] float(&infinity&) issue on windows #34
  • [closed] DiffusionTerm(coeff = CellVariable) functionality #33
  • [tests] conflict_handler = 'ignore' not valid in Python 2.4 #32
  • [closed] Support simple import notation #31
  • [closed] periodic boundary condition support #30
  • [closed] periodic boundary conditions are broken #29
  • [closed] invoke the == for terms #28
  • [bug][wontfix] Combine implicit and explicit diffusion terms #27
  • [closed] doctest extraction with python2.4 #26
  • [bug] make phase field examples more explicit #25
  • [closed] PySparse windows binaries #24
  • [bug] sweep control, iterator object, error norms #23
  • [closed] automated efficiency_test problems #22
  • [bug] Update FiPy to use numpy #21
  • [closed] Test with Python version 2.4 #20
  • [enhancement][terms] Peclet number #19
  • [closed] Memory leak for the leveling problem #18
  • [closed] distanceVariable is broken #17
  • [bug][duplicate] Dimensions #16
  • [bug][duplicate] Boundary conditions and Terms #15
  • [closed] Testing mailing list interface #14
  • [enhancement][meshes] Mesh refactor #13
  • [closed] Refactor viewers #12
  • [closed] Reconcile versions of pysparse #11
  • [closed] check phase field crystal growth #10
  • [closed] implement levelling surfactant equation #9
  • [closed] merge depositionRateVar and extensionVelocity #8
  • [closed] Automate FiPy efficiency test #7
  • [closed] FiPy breaks on windows with Numeric 23.6 #6
  • [closed] axisymmetric 2D mesh #5
  • [closed] Windows installation wizard #4
  • [closed] Windows installation instructions #3
  • [tests] Some tests fail on windows XP #2
  • [viewers] Gnuplot doesn't display on windows #1

- Python
Published by guyer over 7 years ago

https://github.com/usnistgov/fipy - version-3_1_2

  • [closed] nonlinear source term #498
  • [bug][solvers] scipy.LinearBicgstabSolver doesn't take arguments #496
  • [closed] Gmsh call errors #494
  • [closed] Reviewable.io has read-only access, can't leave comments #493
  • [bug][parallel] globalValue raises error from mpi4py #491
  • [closed] PySparse tests fail #484
  • [installation][tests] FiPy development version string not compliant with PEP 440 #482
  • [bug][installation][tests] setuptools 18.4 breaks test suite #476
  • [bug][meshes][numerix] Grid3D broken by numpy 1.10 #475
  • [closed] Mesh3D cellToCellIDs is broken #470
  • [closed] Out-of-sequence Viewer imports #467

- Python
Published by guyer over 7 years ago

https://github.com/usnistgov/fipy - version-3_1_3

  • [closed] gmane is defunct #502
  • [documentation][enhancement] Move the mail archive link to a more prominent place on web page. #253

- Python
Published by guyer over 7 years ago