https://github.com/a-slide/pybiotools
Collection of tools to manipulate Bioinformatic standard file format + Generic file related function collection
Science Score: 59.0%
This score indicates how likely this project is to be science-related based on various indicators:
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○CITATION.cff file
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✓codemeta.json file
Found codemeta.json file -
✓.zenodo.json file
Found .zenodo.json file -
✓DOI references
Found 2 DOI reference(s) in README -
✓Academic publication links
Links to: zenodo.org -
✓Committers with academic emails
1 of 1 committers (100.0%) from academic institutions -
○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (9.9%) to scientific vocabulary
Repository
Collection of tools to manipulate Bioinformatic standard file format + Generic file related function collection
Basic Info
Statistics
- Stars: 3
- Watchers: 1
- Forks: 0
- Open Issues: 0
- Releases: 12
Metadata Files
README.md
pyBioTools v0.2.11
pyBioTools is a collection of python tools to manipulate biological sequences
Full documentation is available at https://adrienleger.com/pyBioTools/
Disclaimer
Please be aware that pyBioTools is a research package that is still under development.
It was tested under Linux Ubuntu 16.04 and in an HPC environment running under Red Hat Enterprise 7.1.
Thank you
Classifiers
- Development Status :: 3 - Alpha
- Intended Audience :: Science/Research
- Topic :: Scientific/Engineering :: Bio-Informatics
- License :: OSI Approved :: GNU General Public License v3 (GPLv3)
- Programming Language :: Python :: 3
citation
Adrien Leger. a-slide/pyBioTools. Zenodo. http://doi.org/10.5281/zenodo.3235625
licence
GPLv3 (https://www.gnu.org/licenses/gpl-3.0.en.html)
Copyright © 2020 Adrien Leger
Authors
- Adrien Leger / aleg@ebi.ac.uk / https://adrienleger.com
Owner
- Name: Adrien Leger
- Login: a-slide
- Kind: user
- Location: Oxford, UK
- Company: @nanoporetech
- Website: https://adrienleger.com/
- Twitter: AdrienLeger2
- Repositories: 50
- Profile: https://github.com/a-slide
Research scientist at Oxford Nanopore Technologies
GitHub Events
Total
Last Year
Committers
Last synced: 12 months ago
Top Committers
| Name | Commits | |
|---|---|---|
| a-slide | a****g@e****k | 91 |
Committer Domains (Top 20 + Academic)
Issues and Pull Requests
Last synced: 10 months ago
All Time
- Total issues: 0
- Total pull requests: 11
- Average time to close issues: N/A
- Average time to close pull requests: 1 minute
- Total issue authors: 0
- Total pull request authors: 1
- Average comments per issue: 0
- Average comments per pull request: 0.0
- Merged pull requests: 11
- Bot issues: 0
- Bot pull requests: 0
Past Year
- Issues: 0
- Pull requests: 0
- Average time to close issues: N/A
- Average time to close pull requests: N/A
- Issue authors: 0
- Pull request authors: 0
- Average comments per issue: 0
- Average comments per pull request: 0
- Merged pull requests: 0
- Bot issues: 0
- Bot pull requests: 0
Top Authors
Issue Authors
Pull Request Authors
- a-slide (11)
Top Labels
Issue Labels
Pull Request Labels
Packages
- Total packages: 1
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Total downloads:
- pypi 322 last-month
- Total dependent packages: 0
- Total dependent repositories: 1
- Total versions: 23
- Total maintainers: 1
pypi.org: pybiotools
pyBioTools is a collection of python tools to manipulate biological sequences
- Homepage: https://github.com/a-slide/pyBioTools
- Documentation: https://pybiotools.readthedocs.io/
- License: GPLv3
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Latest release: 0.2.11
published over 4 years ago
Rankings
Maintainers (1)
Dependencies
- dependency_1__ *
- tqdm >=4.51.0