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raman-processing

https://github.com/noavidovic/raman-processing

Science Score: 44.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ✓
    CITATION.cff file
    Found CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ✓
    .zenodo.json file
    Found .zenodo.json file
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    DOI references
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    Academic publication links
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    Academic email domains
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    Institutional organization owner
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    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (6.5%) to scientific vocabulary
Last synced: 10 months ago · JSON representation ·

Repository

Basic Info
  • Host: GitHub
  • Owner: NoaVidovic
  • Language: Jupyter Notebook
  • Default Branch: main
  • Size: 8.89 MB
Statistics
  • Stars: 0
  • Watchers: 1
  • Forks: 0
  • Open Issues: 0
  • Releases: 1
Created over 2 years ago · Last pushed over 1 year ago
Metadata Files
Readme Citation

README.md

Usage

To run the get_spectrum script, either create a virtual environment using the provided environment file (conda env create -p venv -f environment.yml; conda activate ./venv) or simply run it using a modern version of Python with OpenCV, Numpy and Scipy installed.

The script is called as such: python get_spectrum.py X, where X is the filename of the image you wish to process. The script will make a .csv file with the fitted wavenumbers, raw spectrum, background fit and subtracted spectrum (raw minus background).

By default, the reference spectrum is to be located at data/sapphire_ref_cm++.txt with respect to the script. This can be changed by opening the script with a text editor and modifying the REFERENCE_PATH variable.

Owner

  • Login: NoaVidovic
  • Kind: user

Citation (CITATION.cff) 

cff-version: 1.1.0
message: "If you use this software, please cite it as below."
authors:
- family-names: Noa
  given-names: Vidović
orcid: https://orcid.org/0009-0001-5581-9887
title:NoaVidovic/raman-processing: Raman Spectrum Processing
version: v0.0.1
date-released: 2024-12-14

GitHub Events

Total
  • Release event: 1
  • Public event: 1
  • Push event: 1
  • Create event: 1
Last Year
  • Release event: 1
  • Public event: 1
  • Push event: 1
  • Create event: 1

Dependencies

environment.yml conda
  • jupyter
  • matplotlib
  • opencv
  • pandas
  • scipy