Fasten - fasten-trim trims more

sliding window on finding where adapters are

Scientific Software - Peer-reviewed - Rust
Published by lskatz 11 months ago

Fasten - v0.8.5

What's Changed

• Fasten trim: updated documentation by @lskatz in https://github.com/lskatz/fasten/pull/38
• Fasten sort: minimizers by @lskatz in https://github.com/lskatz/fasten/pull/39

Full Changelog: https://github.com/lskatz/fasten/compare/v0.8.4...v0.8.5

Scientific Software - Peer-reviewed - Rust
Published by lskatz about 1 year ago

Fasten - v0.8.4

Added adapter trimming in fasten_trim.

Scientific Software - Peer-reviewed - Rust
Published by lskatz about 1 year ago

Fasten - v0.8.1

Updated authors list

Scientific Software - Peer-reviewed - Rust
Published by lskatz about 2 years ago

Fasten - v0.8.0

The release for JOSS

Scientific Software - Peer-reviewed - Rust
Published by lskatz about 2 years ago

Fasten - v0.7.2

Scientific Software - Peer-reviewed - Rust
Published by lskatz over 2 years ago

Fasten - v0.6

New executables fasten_inspect and fasten_repair

Scientific Software - Peer-reviewed - Rust
Published by lskatz over 2 years ago

Fasten - v0.5.0

Added in fasten_normalize

Scientific Software - Peer-reviewed - Rust
Published by lskatz about 3 years ago

Fasten - v0.4.4

The same basic functionality but a lot better and with a lot more support (documentation, docker, dedicated website)

CHANGELOG

• updated docs to rust style
• added docs to lskatz.github.io/fasten
• some new unit tests
• --version is a new option for every script
• fasten_sort
• refactored the container and hosting it on github itself
• fasten_convert
• fasten_mutate
• Rewrote print!() so that it doesn't die on empty pipe

Scientific Software - Peer-reviewed - Rust
Published by lskatz almost 4 years ago

Fasten -

Scientific Software - Peer-reviewed - Rust
Published by lskatz almost 8 years ago

Fasten -

Scientific Software - Peer-reviewed - Rust
Published by lskatz almost 8 years ago

Fasten - v0.1.6

This version is on crates.io

Scientific Software - Peer-reviewed - Rust
Published by lskatz almost 8 years ago

Fasten - v0.1.5

Scientific Software - Peer-reviewed - Rust
Published by lskatz almost 8 years ago

Fasten - v0.1.4

Scientific Software - Peer-reviewed - Rust
Published by lskatz almost 8 years ago

Fasten - v0.1.3

I updated some one-liners monica works better now with paired end

Scientific Software - Peer-reviewed - Rust
Published by lskatz almost 8 years ago

Fasten - initial release

The initial ROSS.rs release. Many but not most scripts have been remade. Some algorithms are slightly different than perl-based ROSS, such as friends_monica.

Scientific Software - Peer-reviewed - Rust
Published by lskatz almost 8 years ago