https://github.com/abidlabs/deep-learning-genomics-primer
Contains files for the deep learning in genomics primer.
Science Score: 20.0%
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○CITATION.cff file
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○codemeta.json file
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○.zenodo.json file
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○DOI references
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✓Academic publication links
Links to: nature.com -
✓Committers with academic emails
1 of 2 committers (50.0%) from academic institutions -
○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (5.0%) to scientific vocabulary
Repository
Contains files for the deep learning in genomics primer.
Basic Info
- Host: GitHub
- Owner: abidlabs
- Language: Jupyter Notebook
- Default Branch: master
- Size: 969 KB
Statistics
- Stars: 260
- Watchers: 8
- Forks: 63
- Open Issues: 5
- Releases: 0
Metadata Files
README.md
Deep Learning Genomics Primer
This tutorial is a supplement to the manuscript, A Primer on Deep Learning in Genomics (Nature Genetics, 2018) by James Zou, Mikael Huss, Abubakar Abid, Pejman Mohammadi, Ali Torkamani & Amalio Telentil. Read the accompanying paper here.
See the associated python notebook for the tutorial, or run it right from your browser in a colab notebook.
If you have any questions or feedback regarding this tutorial, please contact Abubakar Abid <a12d@stanford.edu> or James Zou <jamesz@stanford.edu>. Please cite using the bibtex below:
@article{zou2018primer,
title={A primer on deep learning in genomics},
author={Zou, James and Huss, Mikael and Abid, Abubakar and Mohammadi, Pejman and Torkamani, Ali and Telenti, Amalio},
journal={Nature genetics},
pages={1},
year={2018},
publisher={Nature Publishing Group}
}
Owner
- Name: Abubakar Abid
- Login: abidlabs
- Kind: user
- Twitter: abidlabs
- Repositories: 9
- Profile: https://github.com/abidlabs
Working on Gradio (www.gradio.dev) at @huggingface!
GitHub Events
Total
- Watch event: 9
- Fork event: 2
Last Year
- Watch event: 9
- Fork event: 2
Committers
Last synced: over 1 year ago
Top Committers
| Name | Commits | |
|---|---|---|
| Abubakar Abid | a****d@s****u | 23 |
| smlatorreo | s****o@g****m | 2 |
Committer Domains (Top 20 + Academic)
Issues and Pull Requests
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All Time
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- Total pull requests: 3
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- Average time to close pull requests: 14 days
- Total issue authors: 4
- Total pull request authors: 2
- Average comments per issue: 0.75
- Average comments per pull request: 0.0
- Merged pull requests: 2
- Bot issues: 0
- Bot pull requests: 0
Past Year
- Issues: 0
- Pull requests: 0
- Average time to close issues: N/A
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- Issue authors: 0
- Pull request authors: 0
- Average comments per issue: 0
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- Bot issues: 0
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Top Authors
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