https://github.com/access-nri/make_om3_025deg_topo
Science Score: 26.0%
This score indicates how likely this project is to be science-related based on various indicators:
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○CITATION.cff file
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✓codemeta.json file
Found codemeta.json file -
✓.zenodo.json file
Found .zenodo.json file -
○DOI references
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○Scientific vocabulary similarity
Low similarity (7.2%) to scientific vocabulary
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- Watchers: 4
- Forks: 1
- Open Issues: 0
- Releases: 0
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Metadata Files
README.md
makeOM3025deg_topo
Make 0.25-degree topog.nc MOM bathymetry file from the GEBCO 2024 dataset.
Workflow Overview
- Generate Topography:
Use./gen_topog.shto generate the topography and associated files. For 0.25-degree resolution or higher, this will require submission viaqsub.
First, add gdata for your project & working directory to the #PBS -l storage= line in get_topo.sh
Then, use the qsub command to submit the script, passing the required input files as arguments. For example:
bash
qsub -v INPUT_HGRID="/path/to/ocean_hgrid.nc",INPUT_VGRID="/path/to/ocean_vgrid.nc",INPUT_GBCO="/path/to/GEBCO_2024.nc" -P $PROJECT gen_topo.sh
- Finalize Output Files:
Once the output files meet your satisfaction, commit and push the changes, then add the git commit hash as metadata in the output.ncfiles by runningfinalise.sh.
Note on Dependencies
This workflow relies on the xp65 conda environments for running the scripts and generating the outputs. As long as you are a member of the xp65 project, this conda environment is loaded as part of the scripts.
bash
qsub -v INPUT_HGRID=/g/data/vk83/prerelease/configurations/inputs/access-om3/mom/grids/mosaic/global.025deg/2025.01.30/ocean_hgrid.nc,INPUT_VGRID=/g/data/vk83/prerelease/configurations/inputs/access-om3/mom/grids/vertical/global.025deg/2025.01.30/ocean_vgrid.nc,INPUT_GBCO=/g/data/ik11/inputs/GEBCO_2024/GEBCO_2024.nc -P $PROJECT gen_topo.sh
Owner
- Name: ACCESS-NRI
- Login: ACCESS-NRI
- Kind: organization
- Email: access.nri@anu.edu.au
- Website: https://www.access-nri.org.au/
- Repositories: 17
- Profile: https://github.com/ACCESS-NRI
Australian Earth System Simulator - National Research Infrastructure
GitHub Events
Total
- Issues event: 6
- Delete event: 9
- Issue comment event: 25
- Member event: 6
- Push event: 39
- Pull request review comment event: 31
- Pull request review event: 30
- Pull request event: 19
- Fork event: 1
- Create event: 11
Last Year
- Issues event: 6
- Delete event: 9
- Issue comment event: 25
- Member event: 6
- Push event: 39
- Pull request review comment event: 31
- Pull request review event: 30
- Pull request event: 19
- Fork event: 1
- Create event: 11
Issues and Pull Requests
Last synced: 6 months ago
All Time
- Total issues: 4
- Total pull requests: 9
- Average time to close issues: 11 days
- Average time to close pull requests: 1 day
- Total issue authors: 2
- Total pull request authors: 4
- Average comments per issue: 0.5
- Average comments per pull request: 0.44
- Merged pull requests: 4
- Bot issues: 0
- Bot pull requests: 0
Past Year
- Issues: 4
- Pull requests: 9
- Average time to close issues: 11 days
- Average time to close pull requests: 1 day
- Issue authors: 2
- Pull request authors: 4
- Average comments per issue: 0.5
- Average comments per pull request: 0.44
- Merged pull requests: 4
- Bot issues: 0
- Bot pull requests: 0
Top Authors
Issue Authors
- minghangli-uni (3)
- anton-seaice (2)
Pull Request Authors
- minghangli-uni (3)
- anton-seaice (3)
- ezhilsabareesh8 (3)
- navidcy (1)