PhysioLabXR
PhysioLabXR: A Python Platform for Real-Time, Multi-modal, Brain–Computer Interfaces and Extended Reality Experiments - Published in JOSS (2024)
Science Score: 59.0%
This score indicates how likely this project is to be science-related based on various indicators:
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○CITATION.cff file
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✓codemeta.json file
Found codemeta.json file -
✓.zenodo.json file
Found .zenodo.json file -
✓DOI references
Found 8 DOI reference(s) in README -
✓Academic publication links
Links to: joss.theoj.org -
✓Committers with academic emails
5 of 17 committers (29.4%) from academic institutions -
○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (13.9%) to scientific vocabulary
Scientific Fields
Repository
Basic Info
- Host: GitHub
- Owner: PhysioLabXR
- License: gpl-3.0
- Language: Python
- Default Branch: master
- Size: 664 MB
Statistics
- Stars: 41
- Watchers: 2
- Forks: 15
- Open Issues: 8
- Releases: 3
Metadata Files
README.md
PhysioLabXR
A Python Platform for Real-Time, Multi-modal, Brain–Computer Interfaces and Extended Reality Experiments
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Table of Contents
About The Project
PhysioLabXR is a Python-based App for real-time visualizing, recording, and processing (i.e., training ML models and inferencing) data streams. PhysioLabXR can help you build novel interaction interfaces like BCIs and aid you in running experiments. It works best with multi-modal (e.g., combining EEG and eyetracking, camera with speech), high-throughput (>500Mbps/sec), and real-time data streams.
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Check out the paper on Journal of Open Source Software: . Cite:
@article{Li2024, doi = {10.21105/joss.05854}, url = {https://doi.org/10.21105/joss.05854}, year = {2024}, publisher = {The Open Journal}, volume = {9}, number = {93}, pages = {5854}, author = {Ziheng 'Leo' Li and Haowen 'John' Wei and Ziwen Xie and Yunxiang Peng and June Pyo Suh and Steven Feiner and Paul Sajda}, title = {PhysioLabXR: A Python Platform for Real-Time, Multi-modal, Brain–Computer Interfaces and Extended Reality Experiments}, journal = {Journal of Open Source Software} }
Built With
Getting Started
Download and run the executable
Download the latest release exe from here, available for Windows, Mac, and Linux.
Install with pip
PhysioLabXR currently supports Python 3.9, 3.10, and 3.11. Support for Python 3.12 is coming soon.
Install PhysioLabXR's PYPI distribution with
sh
pip install physiolabxr
Then run with
sh
physiolabxr
Run from Source
Alternatively, you can clone the repo and run it from the source.
sh
git clone https://github.com/PhysioLabXR/PhysioLabXR.git
cd PhysioLabXR
pip install -r requirements.txt
The entry point to PhysioLabXR is physiolabxr.py, located in the folder named "physiolabxr". From the root folder, you can run it by:
sh
python physiolabxr/physiolabxr.py
Usage
For more examples, please refer to the tutorials in the documentation
Tutorials have examples for:
- Real-time fixation detection (link)
- Real-time multi-modal event-related-potential classification with EEG and pupillometry
- P300 speller in Unity
- Stroop task with PsychoPy (link [https://physiolabxrdocs.readthedocs.io/en/latest/PsychoPy.html])
More are coming soon!
License
Distributed under the 3-Clause BSD License. See LICENSE.txt for more information.
© 2023 The Trustees of Columbia University in the City of New York. This work may be reproduced, distributed, and otherwise exploited for academic non-commercial purposes only. To obtain a license to this work for commercial purposes, please contact Columbia Technology Ventures at techventures@columbia.edu.
Contact
Ziheng 'Leo' Li - zl2990@columbia.edu
Acknowledgments
We would like to express our gratitude for the support from our colleagues at Columbia University and Worcester Polytechnic Institute. We would also like to thank all the community members who have contributed to PhysioLabXR.
Owner
- Name: PhysioLabXR
- Login: PhysioLabXR
- Kind: organization
- Repositories: 2
- Profile: https://github.com/PhysioLabXR
GitHub Events
Total
- Create event: 20
- Issues event: 1
- Watch event: 7
- Delete event: 6
- Issue comment event: 1
- Member event: 3
- Push event: 117
- Pull request review event: 8
- Pull request review comment event: 7
- Pull request event: 23
- Fork event: 2
Last Year
- Create event: 20
- Issues event: 1
- Watch event: 7
- Delete event: 6
- Issue comment event: 1
- Member event: 3
- Push event: 117
- Pull request review event: 8
- Pull request review comment event: 7
- Pull request event: 23
- Fork event: 2
Committers
Last synced: about 1 year ago
Top Committers
| Name | Commits | |
|---|---|---|
| Ziheng 'Leo' Li | s****e@h****m | 968 |
| HaowenWeiJohn | h****i@w****u | 457 |
| yunxiang | y****8@c****u | 46 |
| junePyo | j****h@g****m | 20 |
| Zeyi Tong | z****3@c****u | 11 |
| Jace Li | y****2@c****u | 10 |
| Millie Wu | m****1@g****m | 9 |
| HannahZ | a****x@g****m | 7 |
| lommytea | t****7@g****m | 4 |
| Hanfei Sun | h****8@g****m | 3 |
| Adithya N | a****0@g****m | 3 |
| Andrew S Liang | c****w@g****m | 3 |
| Anna | a****6@g****m | 2 |
| Kelvin0023 | 2****6@q****m | 2 |
| jiananli306 | 3****6 | 1 |
| Yuyang Li (Ian) | 8****o | 1 |
| nikolo555 | n****2@c****u | 1 |
Committer Domains (Top 20 + Academic)
Issues and Pull Requests
Last synced: 10 months ago
All Time
- Total issues: 15
- Total pull requests: 105
- Average time to close issues: 2 months
- Average time to close pull requests: 10 days
- Total issue authors: 8
- Total pull request authors: 16
- Average comments per issue: 0.87
- Average comments per pull request: 0.11
- Merged pull requests: 84
- Bot issues: 0
- Bot pull requests: 0
Past Year
- Issues: 1
- Pull requests: 25
- Average time to close issues: N/A
- Average time to close pull requests: 19 days
- Issue authors: 1
- Pull request authors: 6
- Average comments per issue: 0.0
- Average comments per pull request: 0.08
- Merged pull requests: 13
- Bot issues: 0
- Bot pull requests: 0
Top Authors
Issue Authors
- HaowenWeiJohn (4)
- lucask07 (3)
- UdaiLaith (3)
- ziwen-xie (1)
- ApocalyVec (1)
- cmicek1 (1)
- xichenhe (1)
- LommyTea (1)
- Jefferyy-Peng (1)
Pull Request Authors
- ApocalyVec (36)
- xichenhe (21)
- HaowenWeiJohn (19)
- zeyiiiii (9)
- Jefferyy-Peng (7)
- LommyTea (6)
- nikolo555 (4)
- Cyno00 (4)
- zhannahz (2)
- mstimberg (2)
- Gear-dev-sudo (2)
- wutwasthat (1)
- BRomans (1)
- InsTiport (1)
- Adithya1610 (1)
Top Labels
Issue Labels
Pull Request Labels
Dependencies
- PyQt5 *
- brainflow *
- ipython *
- matplotlib *
- numpy *
- opencv-python *
- psutil *
- pyautogui *
- pylsl *
- pyqtgraph *
- pyserial *
- pytest-qt *
- pyxdf *
- pyzmq *
- qimage2ndarray *
- scipy *
- setuptools *
- sklearn *
- actions/checkout v3 composite
- actions/setup-python v4 composite
- tlambert03/setup-qt-libs v1 composite
- PyOpenGL * development
- PyOpenGL_accelerate * development
- PyQt6 * development
- brainflow * development
- matplotlib * development
- numba * development
- numpy >=1.26.0 development
- opencv-python * development
- psutil * development
- pylsl * development
- pyqtgraph * development
- pyscreeze * development
- pyserial * development
- pytest-qt * development
- pyxdf * development
- pyzmq * development
- scikit-learn * development
- scipy * development
- setuptools * development
- soundfile * development
