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Open Source Science

https://github.com/adamrtalbot/nf-lineage-schema

https://github.com/adamrtalbot/nf-lineage-schema

Science Score: 26.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ✓
    .zenodo.json file
    Found .zenodo.json file
  • ○
    DOI references
  • ○
    Academic publication links
  • ○
    Academic email domains
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (8.2%) to scientific vocabulary
Last synced: 10 months ago · JSON representation

Repository

Basic Info
  • Host: GitHub
  • Owner: adamrtalbot
  • Default Branch: main
  • Size: 69.3 KB
Statistics
  • Stars: 0
  • Watchers: 0
  • Forks: 0
  • Open Issues: 0
  • Releases: 1
Created 12 months ago · Last pushed 12 months ago
Metadata Files
Readme

README.md

Nextflow Lineage Schema

⚠️ Disclaimer

This is an unofficial schema for the Nextflow lineage feature.

  • It is built manually by me
  • It is not supported in any way, shape, or form
  • Use at your own risk

Documentation

See the docs directory for the documentation on the nf-lineage models.

Documentation is automatically generated using @adobe/jsonschema2md.

Contributing

Please feel free to:

  • Open issues for bugs, questions, or suggestions
  • Submit pull requests for improvements
  • Help make this schema better for the community

Schema

The main schema file is nextflow-lineage-v1beta1-schema.json which defines the structure for Nextflow lineage data.

Usage

You can use the schema with any system that supports JSON schema version 2020-12. See the JSON schema documents for more tools which can use this schema file.

As an example, I have built documentation for the schema using @adobe/jsonschema2md which can be found in the docs directory. This also writes the out/nextflow-lineage-v1beta1-schema.json file which is parsed by the docs tool.

Owner

  • Name: Adam Talbot
  • Login: adamrtalbot
  • Kind: user
  • Location: Warwick, UK
  • Company: @seqeralabs

Bioinformatics Engineer at @seqeralabs

GitHub Events

Total
  • Release event: 1
  • Push event: 2
  • Create event: 2
Last Year
  • Release event: 1
  • Push event: 2
  • Create event: 2