https://github.com/aehrc/svep
Science Score: 36.0%
This score indicates how likely this project is to be science-related based on various indicators:
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○CITATION.cff file
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✓codemeta.json file
Found codemeta.json file -
✓.zenodo.json file
Found .zenodo.json file -
○DOI references
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○Academic publication links
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✓Committers with academic emails
3 of 6 committers (50.0%) from academic institutions -
○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (6.3%) to scientific vocabulary
Repository
Basic Info
- Host: GitHub
- Owner: aehrc
- Language: Perl
- Default Branch: master
- Size: 17.5 MB
Statistics
- Stars: 4
- Watchers: 9
- Forks: 2
- Open Issues: 0
- Releases: 0
Metadata Files
README.md
Serverless VEP
Why serverless?
Serverless means the service does not require any servers to be provisioned. The idea is to minimise running costs, as well as support arbitrary scalablility. It also means setup is very fast.
Installation
Install using terraform init to pull the module, followed by running
Running terraform apply will create the infrastucture.
For adding data to the beacon, see the API.
To shut down the entire service run terraform destroy. Any created datasets
will be lost (but not the VCFs on which they are based).
For standalone use the aws provider will need to be added in main.tf. See the example for more information.
Known Issues
Cannot run sVEP without creating a reference S3 bucket - should be fixed soon
Initial sVEP version doesnt support structural variants and regulatory regions
Concat function is still in the development phase
Owner
- Name: The Australian e-Health Research Centre
- Login: aehrc
- Kind: organization
- Website: https://aehrc.com
- Twitter: ehealthresearch
- Repositories: 101
- Profile: https://github.com/aehrc
The Australian e-Health Research Centre (AEHRC) is CSIRO’s digital health research program.
GitHub Events
Total
Last Year
Committers
Last synced: about 1 year ago
Top Committers
| Name | Commits | |
|---|---|---|
| Brendan Hosking | b****g@g****m | 29 |
| Yatish Jain | y****n@c****u | 10 |
| NickEdwards7502 | n****2@g****m | 5 |
| Anuradha | A****i@c****u | 2 |
| Roc Reguant | r****t@g****m | 1 |
| jai014 | j****4@c****u | 1 |
Committer Domains (Top 20 + Academic)
Issues and Pull Requests
Last synced: about 1 year ago
All Time
- Total issues: 0
- Total pull requests: 0
- Average time to close issues: N/A
- Average time to close pull requests: N/A
- Total issue authors: 0
- Total pull request authors: 0
- Average comments per issue: 0
- Average comments per pull request: 0
- Merged pull requests: 0
- Bot issues: 0
- Bot pull requests: 0
Past Year
- Issues: 0
- Pull requests: 0
- Average time to close issues: N/A
- Average time to close pull requests: N/A
- Issue authors: 0
- Pull request authors: 0
- Average comments per issue: 0
- Average comments per pull request: 0
- Merged pull requests: 0
- Bot issues: 0
- Bot pull requests: 0