https://github.com/agahkarakuzu/bids2nf
Emits nextflow channels from Brain Imaging Data Structure data.
Science Score: 26.0%
This score indicates how likely this project is to be science-related based on various indicators:
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○CITATION.cff file
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✓codemeta.json file
Found codemeta.json file -
✓.zenodo.json file
Found .zenodo.json file -
○DOI references
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○Academic publication links
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○Academic email domains
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○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (7.4%) to scientific vocabulary
Keywords
bids-apps
bids-converter
bids-format
bidsapp
mri
neuroimaging
neuroscience
nextflow
qmri
reproducible-research
Last synced: 5 months ago
·
JSON representation
Repository
Emits nextflow channels from Brain Imaging Data Structure data.
Basic Info
- Host: GitHub
- Owner: agahkarakuzu
- License: mit
- Language: Nextflow
- Default Branch: main
- Homepage: https://agah.dev/bids2nf
- Size: 779 KB
Statistics
- Stars: 3
- Watchers: 0
- Forks: 0
- Open Issues: 0
- Releases: 0
Topics
bids-apps
bids-converter
bids-format
bidsapp
mri
neuroimaging
neuroscience
nextflow
qmri
reproducible-research
Created 8 months ago
· Last pushed 8 months ago
Metadata Files
Readme
License
README.md
bids2nf
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bids2nf is a lightweight utility that parses BIDS (Brain Imaging Data Structure) datasets and emits structured Nextflow channels. These channels provide a standardized interface for building scalable, modular, and reproducible neuroimaging workflows with https://nextflow.io. |
Refer to the user documentation for setup instructions and usage examples.
Contributing
Contributions are welcome! Please open issues or pull requests to help improve bids2nf.
Owner
- Name: Agah
- Login: agahkarakuzu
- Kind: user
- Location: Montreal
- Company: @neuropoly @qMRLab @neurolibre
- Website: https://agahkarakuzu.github.io
- Twitter: agahkarakuzu
- Repositories: 114
- Profile: https://github.com/agahkarakuzu
GitHub Events
Total
- Push event: 36
- Create event: 1
Last Year
- Push event: 36
- Create event: 1
Dependencies
.github/workflows/test.yml
actions
- actions/checkout v4 composite
- actions/setup-java v4 composite
- actions/upload-artifact v4 composite