https://github.com/agentproject/wp6

https://github.com/agentproject/wp6

Science Score: 13.0%

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  • Host: GitHub
  • Owner: AGENTproject
  • License: mit
  • Default Branch: main
  • Size: 1.95 KB
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Created over 4 years ago · Last pushed over 4 years ago
Metadata Files
Readme License

README.md

Workpackage 6:

Objectives of Workpackage 6:

  • O6.1: Develop an infrastructure to manage and analyse genotypic and phenotypic data.
  • O6.2: Support the active, integrated management of genetic resources (GenRes) by genebanks (GB).
  • O6.3: Empower users of GenRes to identify material of interest with accuracy and precision.
  • O6.4: Provide a modelling environment allowing researchers and breeders to test new accessions against reference data.

Tasks of Workpackage 6:

  • Task 6.1: Development of an open infrastructure for the management of genotypic and phenotypic data.
  • Task 6.2: Development of a Portable set of Interoperable Tools for Analysis and Predictive Modelling of Genetic Resources
  • Task 6.3: Enhancement of EURISCO with new tools for data discovery and visualization.

Deliverables of Workpackage 6:

| No | Brief description | Lead Participant | Type | Dissemination level | Delivery date | |------|:-----------------------------------------------------|------------------|------|---------------------|--------------| | D6.1 |Data Management Plan (DMP) | 1-IPK | ORDP | CO | 6 | | D6.2 | AGENT database infrastructure designed, tested and deployed | 1-IPK | OTHER | CO | 18 | | D6.3 | Containerised pipeline for data analysis implemented, tested and deployed | 9-WR | OTHER | CO | 24 | | D6.4 | ADiscovery and retrieval of genomic and phenotypic data possible through EURISCO and additional search interfaces | 16-INRAE | DEC | CO | 24 | | D6.5 | Final release of the AGENT data platform, including tools for data management, analysis, prediction,
visualisation and access | 17-RGBK | DEC | CO | 60 |

Owner

  • Name: EU H2020 AGENT project
  • Login: AGENTproject
  • Kind: organization

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