https://github.com/agnostiqhq/covalent-azurebatch-plugin
Executor plugin interfacing Covalent with Azure Batch
Science Score: 39.0%
This score indicates how likely this project is to be science-related based on various indicators:
-
○CITATION.cff file
-
✓codemeta.json file
Found codemeta.json file -
✓.zenodo.json file
Found .zenodo.json file -
✓DOI references
Found 2 DOI reference(s) in README -
○Academic publication links
-
○Committers with academic emails
-
○Institutional organization owner
-
○JOSS paper metadata
-
○Scientific vocabulary similarity
Low similarity (10.0%) to scientific vocabulary
Keywords
Keywords from Contributors
Repository
Executor plugin interfacing Covalent with Azure Batch
Basic Info
- Host: GitHub
- Owner: AgnostiqHQ
- License: apache-2.0
- Language: Python
- Default Branch: develop
- Homepage: https://covalent.xyz
- Size: 148 KB
Statistics
- Stars: 4
- Watchers: 10
- Forks: 0
- Open Issues: 9
- Releases: 4
Topics
Metadata Files
README.md
Covalent Azure Batch Plugin
Covalent is a Pythonic workflow tool used to execute tasks on advanced computing hardware. This executor plugin interfaces Covalent with Microsoft Azure Batch.
1. Installation
To use this plugin with Covalent, install it using pip:
sh
pip install covalent-azurebatch-plugin
2. Usage Example
This is an example of how a workflow can be constructed to use the Azure Batch executor. In the example, we train a Support Vector Machine (SVM) and use an instance of the executor to execute the train_svm electron. Note that we also require DepsPip which will be required to execute the electrons.
```python from numpy.random import permutation from sklearn import svm, datasets import covalent as ct
from covalent.executor import AzureBatchExecutor
deps_pip = ct.DepsPip( packages=["numpy==1.22.4", "scikit-learn==1.1.2"] )
executor = AzureBatchExecutor( tenantid="tenant-id", clientid="client-id", clientsecret="client-secret", batchaccounturl="https://covalent.eastus.batch.azure.com", batchaccountdomain="batch.core.windows.net", storageaccountname="covalentbatch", storageaccountdomain="blob.core.windows.net", baseimageuri="covalent.azurecr.io/covalent-executor-base:latest", poolid="covalent-pool", retries=3, timelimit=300, cachedir="/tmp/covalent", poll_freq=10 )
Use executor plugin to train our SVM model
@ct.electron( executor=executor, depspip=depspip ) def train_svm(data, C, gamma): X, y = data clf = svm.SVC(C=C, gamma=gamma) clf.fit(X[90:], y[90:]) return clf
@ct.electron def loaddata(): iris = datasets.loadiris() perm = permutation(iris.target.size) iris.data = iris.data[perm] iris.target = iris.target[perm] return iris.data, iris.target
@ct.electron def scoresvm(data, clf): Xtest, ytest = data return clf.score( Xtest[:90],y_test[:90] )
@ct.lattice def runexperiment(C=1.0, gamma=0.7): data = loaddata() clf = trainsvm( data=data, C=C, gamma=gamma ) score = scoresvm( data=data, clf=clf ) return score
Dispatch the workflow.
dispatchid = ct.dispatch(runexperiment)( C=1.0, gamma=0.7 )
Wait for our result and get result value
result = ct.getresult(dispatchid, wait=True).result
print(result) ```
During the execution of the workflow, one can navigate to the UI to see the status of the workflow. Once completed, the above script should also output a value with the score of our model.
sh
0.8666666666666667
In order for the above workflow to run successfully, one has to provision the required cloud resources as mentioned in the section Required Microsoft Azure Batch Resources.
3. Configuration
There are many configuration options that can be passed in to the class ct.executor.AzureBatchExecutor or by modifying the covalent config file under the section [executors.azurebatch].
For more information about all of the possible configuration values visit our read the docs (RTD) guide for this plugin.
4. Required Microsoft Azure Resources
In order to run your workflows with covalent there are a few notable Microsoft Azure resources that need to be provisioned first.
The required Azure resources are:
1. Batch account
2. Storage account
3. Resource group
4. Container registry (custom images only)
5. Pool of compute nodes
For more information regarding which cloud resources need to be provisioned visit our read the docs (RTD) guide for this plugin.
Getting Started with Covalent
For more information on how to get started with Covalent, check out the project homepage and the official documentation.
Release Notes
Release notes are available in the Changelog.
Citation
Please use the following citation in any publications:
W. J. Cunningham, S. K. Radha, F. Hasan, J. Kanem, S. W. Neagle, and S. Sanand. Covalent. Zenodo, 2022. https://doi.org/10.5281/zenodo.5903364
License
Covalent is licensed under the Apache License 2.0. See the LICENSE file or contact the support team for more details.
Owner
- Name: Agnostiq
- Login: AgnostiqHQ
- Kind: organization
- Email: contact@agnostiq.ai
- Location: Toronto
- Website: https://agnostiq.ai
- Twitter: AgnostiqHQ
- Repositories: 37
- Profile: https://github.com/AgnostiqHQ
Developing Software for Advanced Computing
GitHub Events
Total
- Push event: 3
Last Year
- Push event: 3
Committers
Last synced: 10 months ago
Top Committers
| Name | Commits | |
|---|---|---|
| CovalentOpsBot | c****t | 15 |
| Faiyaz Hasan | f****1@g****m | 13 |
| Will Cunningham | w****7 | 3 |
| mpvgithub | 1****b | 2 |
| Sankalp Sanand | s****p@a****i | 1 |
| Alejandro Esquivel | ae@a****d | 1 |
Committer Domains (Top 20 + Academic)
Issues and Pull Requests
Last synced: 6 months ago
All Time
- Total issues: 5
- Total pull requests: 36
- Average time to close issues: 7 days
- Average time to close pull requests: 16 days
- Total issue authors: 4
- Total pull request authors: 9
- Average comments per issue: 0.6
- Average comments per pull request: 1.31
- Merged pull requests: 20
- Bot issues: 0
- Bot pull requests: 6
Past Year
- Issues: 0
- Pull requests: 0
- Average time to close issues: N/A
- Average time to close pull requests: N/A
- Issue authors: 0
- Pull request authors: 0
- Average comments per issue: 0
- Average comments per pull request: 0
- Merged pull requests: 0
- Bot issues: 0
- Bot pull requests: 0
Top Authors
Issue Authors
- araghukas (2)
- fuyunyun1 (1)
- kessler-frost (1)
- AlejandroEsquivel (1)
Pull Request Authors
- FyzHsn (12)
- dependabot[bot] (5)
- araghukas (4)
- mpvgithub (4)
- AlejandroEsquivel (3)
- wjcunningham7 (3)
- kessler-frost (2)
- venkatBala (2)
- pre-commit-ci[bot] (1)
Top Labels
Issue Labels
Pull Request Labels
Packages
- Total packages: 1
-
Total downloads:
- pypi 21 last-month
- Total dependent packages: 0
- Total dependent repositories: 0
- Total versions: 4
- Total maintainers: 2
pypi.org: covalent-azurebatch-plugin
Covalent Azure Batch Plugin
- Homepage: https://github.com/AgnostiqHQ/covalent-azurebatch-plugin
- Documentation: https://covalent-azurebatch-plugin.readthedocs.io/
- License: Apache License 2.0
-
Latest release: 0.17.0
published about 2 years ago
Rankings
Maintainers (2)
Dependencies
- EndBug/add-and-commit v9 composite
- actions/checkout v3 composite
- actions/checkout master composite
- peterjgrainger/action-changelog-reminder v1.3.0 composite
- actions/checkout v3 composite
- pilosus/action-pip-license-checker main composite
- actions/checkout v2 composite
- actions/setup-python v2 composite
- ncipollo/release-action v1 composite
- actions-ecosystem/action-get-latest-tag v1 composite
- actions/checkout v3 composite
- actions/setup-python v2 composite
- codecov/codecov-action v3 composite
- AgnostiqHQ/covalent/.github/actions/version develop composite
- actions/checkout v3 composite
- ${COVALENT_BASE_IMAGE} latest build
- azure-batch ==13.0.0
- azure-identity ==1.12.0
- azure-storage-blob ==12.14.1
- covalent >=0.202.0,<1
- numpy ==1.23.2 test
- python-dotenv ==0.21.0 test
- scikit-learn ==1.1.2 test
- flake8 ==3.9.2 test
- isort ==5.7.0 test
- mock ==4.0.3 test
- pre-commit ==2.13.0 test
- pytest ==6.2.5 test
- pytest-asyncio ==0.19.0 test
- pytest-cov ==2.12.0 test
- pytest-mock ==3.6.1 test