memstim-hh
Science Score: 44.0%
This score indicates how likely this project is to be science-related based on various indicators:
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✓CITATION.cff file
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✓codemeta.json file
Found codemeta.json file -
✓.zenodo.json file
Found .zenodo.json file -
○DOI references
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○Academic publication links
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○Institutional organization owner
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○Scientific vocabulary similarity
Low similarity (3.0%) to scientific vocabulary
Last synced: 8 months ago
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JSON representation
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Repository
Basic Info
- Host: GitHub
- Owner: NikVard
- License: gpl-3.0
- Language: Jupyter Notebook
- Default Branch: master
- Size: 42.6 MB
Statistics
- Stars: 0
- Watchers: 1
- Forks: 1
- Open Issues: 0
- Releases: 0
Created about 2 years ago
· Last pushed almost 2 years ago
Metadata Files
Readme
License
Citation
README.md
memstim-hh
MEMory STIMulation, a dynamical computational model of theta-nested gamma oscillations w/ theta phase reset interfacing Kuramoto oscillators with Hodgkin-Huxley neurons.
The model described here was used to produce the following publication in eLife. If you use this work or refer to the model, please cite the original work accordingly.
To run the model, follow the setup instructions found in setup-env/instructions.txt.
Owner
- Name: Nikolaos Vardalakis
- Login: NikVard
- Kind: user
- Repositories: 1
- Profile: https://github.com/NikVard
Citation (CITATION.cff)
# This CITATION.cff file was generated with cffinit.
# Visit https://bit.ly/cffinit to generate yours today!
cff-version: 1.2.0
title: memstim
message: >-
If you use this software, please cite it using the
metadata from this file.
type: software
authors:
- given-names: Nikolaos
family-names: Vardalakis
email: nikolaos.vardalakis@u-bordeaux.fr
affiliation: University of Bordeaux
orcid: 'https://orcid.org/0000-0002-5436-4091'
- given-names: Amelie
family-names: Aussel
email: amelie.aussel@inria.fr
affiliation: INRIA
orcid: 'https://orcid.org/0000-0003-0498-2905'
- given-names: Nicolas
family-names: Rougier
email: nicolas.rougier@inria.fr
affiliation: INRIA
orcid: 'https://orcid.org/0000-0002-6972-589X'
- given-names: Fabien
family-names: Wagner
email: fabien.wagner@u-bordeaux.fr
affiliation: CNRS
orcid: 'https://orcid.org/0000-0002-9582-6109'
identifiers:
- type: doi
value: 10.5281/zenodo.8354941
description: Zenodo release (post-revision)
keywords:
- neuroscience
- hippocampus
- python
- brian2
- hodgkin-huxley
- oscillations
license: GPL-3.0
commit: 7fb24413abbe22deae39904459df4b74da19c4bc
GitHub Events
Total
- Fork event: 1
Last Year
- Fork event: 1
Dependencies
model/setup.py
pypi
setup-env/requirements.txt
pypi
- Brian2 ==2.4.2
- Cython ==0.29.24
- joblib ==1.0.1
- matplotlib ==3.4.3
- numba ==0.54.0
- numpy ==1.20.3
- tqdm ==4.62.3