https://github.com/ahasverus/practice1
Science Score: 26.0%
This score indicates how likely this project is to be science-related based on various indicators:
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○CITATION.cff file
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✓codemeta.json file
Found codemeta.json file -
○.zenodo.json file
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✓DOI references
Found 2 DOI reference(s) in README -
○Academic publication links
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○Committers with academic emails
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○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (14.7%) to scientific vocabulary
Last synced: 6 months ago
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JSON representation
Repository
Basic Info
- Host: GitHub
- Owner: ahasverus
- License: gpl-2.0
- Language: R
- Default Branch: main
- Size: 1.52 MB
Statistics
- Stars: 0
- Watchers: 1
- Forks: 0
- Open Issues: 0
- Releases: 0
Created over 3 years ago
· Last pushed over 3 years ago
Metadata Files
Readme
License
README.Rmd
---
output: github_document
---
```{r, include = FALSE}
knitr::opts_chunk$set(collapse = TRUE,
comment = "#>",
fig.path = "man/figures/",
out.width = "100%")
```
# :mortar_board: Practice 1 - Research Compendium 
[](https://choosealicense.com/licenses/gpl-2.0/)
[](https://github.com/rdatatoolbox/practice1/actions/workflows/pkgdown.yaml)
Structure of the research compendium of the practice 1 of the workshop
**Data Toolbox for Reproducible Research in Ecology**
### Content
This repository is structured as follow:
- [`data/`](https://github.com/rdatatoolbox/practice1/tree/master/data):
contains all raw data required to perform analyses
- [`analyses/`](https://github.com/rdatatoolbox/practice1/tree/master/analyses/):
contains R scripts to run each step of the workflow
- [`R/`](https://github.com/rdatatoolbox/practice1/tree/master/R):
contains R functions developed especially for this project
- [`DESCRIPTION`](https://github.com/rdatatoolbox/practice1/tree/master/DESCRIPTION):
contains project metadata (author, date, dependencies, etc.)
- [`make.R`](https://github.com/rdatatoolbox/practice1/tree/master/make.R):
main R script to run the entire project by calling each R script stored in the `analyses/` folder
### Usage
Clone the repository, open R/RStudio and run:
```{r eval = FALSE}
source("make.R")
```
### Notes
- All required packages, listed in the `DESCRIPTION` file, will be installed (if necessary)
- All required packages and R functions will be loaded
- Some analyses listed in the `make.R` might take time
### How to cite
> Casajus N, Bonnici I, Dray S, Gimenez O, Guéry L, Guilhaumon F, Schiettekatte NMD & Siberchicot A (2022) Workshop FRB-CESAB & GdR EcoStat: Data Toolbox for Reproducible Research in Computational Ecology. Zenodo. .
Owner
- Name: Nicolas Casajus
- Login: ahasverus
- Kind: user
- Location: Montpellier, France
- Company: @FRBCesab
- Website: https://nicolascasajus.fr
- Repositories: 89
- Profile: https://github.com/ahasverus
Data scientist
GitHub Events
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Last Year
Committers
Last synced: 6 months ago
Top Committers
| Name | Commits | |
|---|---|---|
| Nicolas Casajus | n****s@g****m | 1 |
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Last synced: 9 months ago
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