Releases | Open Source Science

What's Changed

Make sure that the incoming Phyx file has both phylorefs and phylogenies keys by @gaurav in https://github.com/phyloref/klados/pull/349
Make the node circle size configurable by @gaurav in https://github.com/phyloref/klados/pull/345
Reset reasoning on phylogeny modification by @gaurav in https://github.com/phyloref/klados/pull/348
Improved placeholder text for the phylogeny curator notes field by @gaurav in https://github.com/phyloref/klados/pull/353
Add a popover with a link to the CSV export documentation by @gaurav in https://github.com/phyloref/klados/pull/352
Citation should be stored in namePublishedIn, not dwc:namePublishedIn by @gaurav in https://github.com/phyloref/klados/pull/351
Bump nanoid from 3.3.7 to 3.3.8 by @dependabot[bot] in https://github.com/phyloref/klados/pull/341
Bump vite and @vitejs/plugin-legacy by @dependabot[bot] in https://github.com/phyloref/klados/pull/355
Upgrade packages by @gaurav in https://github.com/phyloref/klados/pull/356
Make phyloref identifier editable by @gaurav in https://github.com/phyloref/klados/pull/362
Make selected UI more visible by @gaurav in https://github.com/phyloref/klados/pull/361
Add explanation of base IRI in n-Quads export by @gaurav in https://github.com/phyloref/klados/pull/364
Upgraded packages using npm upgrade by @gaurav in https://github.com/phyloref/klados/pull/370
Minor fixes to PhyloTree and BTable by @gaurav in https://github.com/phyloref/klados/pull/368
Add support for appending Phyx files by @gaurav in https://github.com/phyloref/klados/pull/363

Full Changelog: https://github.com/phyloref/klados/compare/v0.6.0...v0.7.0

- Vue
Published by gaurav 9 months ago

What's Changed

Update to v0.5.1 by @gaurav in https://github.com/phyloref/klados/pull/310
Bump crypto-js from 4.1.1 to 4.2.0 by @dependabot in https://github.com/phyloref/klados/pull/311
Modify taxonomic units on phylogenies by @gaurav in https://github.com/phyloref/klados/pull/307
Upgrade phylotree.js and fix node renaming by @gaurav in https://github.com/phyloref/klados/pull/312
Replaced Vue variables with Vite variables, including APP_VERSION by @gaurav in https://github.com/phyloref/klados/pull/323
Support phylogenies and phyloreferences that cannot be parsed by @gaurav in https://github.com/phyloref/klados/pull/308
Add an option to export phylogenies in Nexus by @gaurav in https://github.com/phyloref/klados/pull/313
Improve double quote warning for Nexus export by @gaurav in https://github.com/phyloref/klados/pull/329
Documentation and Summary page improvements by @gaurav in https://github.com/phyloref/klados/pull/321
Fix uptime test by @gaurav in https://github.com/phyloref/klados/pull/332
Fixed references to defaultNomenclaturalCodeURI by @gaurav in https://github.com/phyloref/klados/pull/335
Simplify the Specifier component by @gaurav in https://github.com/phyloref/klados/pull/333
Display multiple phylogenies by @gaurav in https://github.com/phyloref/klados/pull/315

Full Changelog: https://github.com/phyloref/klados/compare/v0.5.1...v0.6.0

- Vue
Published by gaurav about 1 year ago

klados - Klados v0.5.1

Full Changelog: Updated version number, fixed deployment (https://github.com/phyloref/klados/pull/310)

https://github.com/phyloref/klados/compare/v0.5.0...v0.5.1

- Vue
Published by gaurav over 2 years ago

What's Changed

Replace cladeDefinition with definition by @gaurav in https://github.com/phyloref/klados/pull/268
Release/v0.4.0 by @gaurav in https://github.com/phyloref/klados/pull/265
User interface improvements by @gaurav in https://github.com/phyloref/klados/pull/259
Add delete button to PhylorefView and PhylogenyView by @gaurav in https://github.com/phyloref/klados/pull/267
Fixed text in "Actual resolved nodes" field in PhylorefView by @gaurav in https://github.com/phyloref/klados/pull/266
Added a test for the reasoner backend by @gaurav in https://github.com/phyloref/klados/pull/274
Replace × with trash by @gaurav in https://github.com/phyloref/klados/pull/275
Store curation information and default nomenclatural code in cookies by @gaurav in https://github.com/phyloref/klados/pull/260
Add additional example file: Fisher et al, 2007 by @gaurav in https://github.com/phyloref/klados/pull/278
Add support for phylorefs with apomorphies by @gaurav in https://github.com/phyloref/klados/pull/286
Add citation by @gaurav in https://github.com/phyloref/klados/pull/288
Fix CITATION.cff by @gaurav in https://github.com/phyloref/klados/pull/295
Standardize curator notes by @gaurav in https://github.com/phyloref/klados/pull/296
Remove unnecessary placeholder text by @gaurav in https://github.com/phyloref/klados/pull/297
Add Testudinata from phylonym as an example of an apomorphy-based phyloref by @gaurav in https://github.com/phyloref/klados/pull/291
Replace the deprecated vue-cli-service with the vite tool currently recommended for Vue 2 by @gaurav in https://github.com/phyloref/klados/pull/303
Delete duplicated citation code by @gaurav in https://github.com/phyloref/klados/pull/304
Add phylotree.js as an NPM package by @gaurav in https://github.com/phyloref/klados/pull/305
Fix borders on sidebar by @gaurav in https://github.com/phyloref/klados/pull/306

Full Changelog: https://github.com/phyloref/klados/compare/v0.4.0...v0.5.0

- Vue
Published by gaurav over 2 years ago

What's Changed

Release of v0.3.1 by @gaurav in https://github.com/phyloref/klados/pull/201
Upgraded NPM packages using npm upgrade by @gaurav in https://github.com/phyloref/klados/pull/205
Phyx and JSON-LD downloads are now named usefully by @gaurav in https://github.com/phyloref/klados/pull/229
Export as N-quads by @gaurav in https://github.com/phyloref/klados/pull/230
Add Open Tree of Life resolution by @gaurav in https://github.com/phyloref/klados/pull/233
Add deletion button for citations by @gaurav in https://github.com/phyloref/klados/pull/234
Upgraded packages using npm upgrade by @gaurav in https://github.com/phyloref/klados/pull/248
Export Phyx view as CSV by @gaurav in https://github.com/phyloref/klados/pull/238
Lint code and upgrade NPM packages by @gaurav in https://github.com/phyloref/klados/pull/256

Full Changelog: https://github.com/phyloref/klados/compare/v0.3.1...v0.4.0

- Vue
Published by gaurav over 3 years ago

This minor version only adds two minor features to the previous release: you can now rename nodes on phylogenies, and the primary phylogeny citation is now displayed next to the phylogeny in the Phyloref view.

Released in https://github.com/phyloref/klados/pull/201

- Vue
Published by gaurav over 5 years ago