Data

Tools

Indexes

Applications

Experiments

Open Source Science

Recent Releases of epiworldR

epiworldR - v0.8.3.0 (CRAN)

What's Changed

  • Bug fixes on epiworld C++ by @gvegayon in https://github.com/UofUEpiBio/epiworldR/pull/114

Full Changelog: https://github.com/UofUEpiBio/epiworldR/compare/v0.8.2.0...v0.8.3.0

Scientific Software - Peer-reviewed - R
Published by gvegayon 7 months ago

epiworldR - v0.8.2.0

What's Changed

  • Fixes to the measles and mixing model (+ improvements) by @gvegayon in https://github.com/UofUEpiBio/epiworldR/pull/103
  • Improve measles docs and added some tests by @gvegayon in https://github.com/UofUEpiBio/epiworldR/pull/105
  • Remove fat by @gvegayon in https://github.com/UofUEpiBio/epiworldR/pull/106

Full Changelog: https://github.com/UofUEpiBio/epiworldR/compare/v0.8.1.0...v0.8.2.0

Scientific Software - Peer-reviewed - R
Published by apulsipher 8 months ago

epiworldR - v0.8.1.0

What's Changed

  • Add ForeSITE badge to README.md by @apulsipher in https://github.com/UofUEpiBio/epiworldR/pull/78
  • Create input param type checks for models by @apulsipher in https://github.com/UofUEpiBio/epiworldR/pull/80
  • Add note on versioning policy to README by @apulsipher in https://github.com/UofUEpiBio/epiworldR/pull/92
  • Add DEVELOPMENT.md with information on versioning and CRAN submission by @apulsipher in https://github.com/UofUEpiBio/epiworldR/pull/94
  • Add vignette with advanced model example by @apulsipher in https://github.com/UofUEpiBio/epiworldR/pull/93
  • Implement draw diagram features from C++ library by @apulsipher in https://github.com/UofUEpiBio/epiworldR/pull/97
  • Attempt to fix failing R CMD check GHA on macOS by @apulsipher in https://github.com/UofUEpiBio/epiworldR/pull/95
  • Measlesquarantine by @gvegayon in https://github.com/UofUEpiBio/epiworldR/pull/91
  • Fixing Rt values (new version of epiworld) and misc by @gvegayon in https://github.com/UofUEpiBio/epiworldR/pull/98
  • Remove unneeded plot() definitions by @apulsipher in https://github.com/UofUEpiBio/epiworldR/pull/100
  • Prep for CRAN submission by @apulsipher in https://github.com/UofUEpiBio/epiworldR/pull/102

Full Changelog: https://github.com/UofUEpiBio/epiworldR/compare/v0.6.1.0...v0.8.1.0

Scientific Software - Peer-reviewed - R
Published by apulsipher 8 months ago

epiworldR - v0.6.1.0

What's Changed

  • Fix clang compiler bug for CRAN submission by @apulsipher in https://github.com/UofUEpiBio/epiworldR/pull/75

Full Changelog: https://github.com/UofUEpiBio/epiworldR/compare/v0.6.0.0...v0.6.1.0

Scientific Software - Peer-reviewed - R
Published by apulsipher 11 months ago

epiworldR - v0.6.0.0

What's Changed

  • Using tidyverse 4.4.0 as base dev image by @gvegayon in https://github.com/UofUEpiBio/epiworldR/pull/28
  • Update how seeds are handled by @gvegayon in https://github.com/UofUEpiBio/epiworldR/pull/29
  • Seed patch - patch by @gvegayon in https://github.com/UofUEpiBio/epiworldR/pull/30
  • Export LFMCMC by @apulsipher in https://github.com/UofUEpiBio/epiworldR/pull/27
  • Implement today() in model-methods.R by @apulsipher in https://github.com/UofUEpiBio/epiworldR/pull/46
  • Update unit testing by @apulsipher in https://github.com/UofUEpiBio/epiworldR/pull/38
  • Porting addparam and rmglobalevent by @gvegayon in https://github.com/UofUEpiBio/epiworldR/pull/47
  • Implements getter functions for LFMCMC by @apulsipher in https://github.com/UofUEpiBio/epiworldR/pull/49
  • Lfmcmc rand engine by @gvegayon in https://github.com/UofUEpiBio/epiworldR/pull/51
  • Exposes more LFMCMC methods and updates epiworld by @gvegayon in https://github.com/UofUEpiBio/epiworldR/pull/52
  • Fix naming conventions to match C++ library by @apulsipher in https://github.com/UofUEpiBio/epiworldR/pull/58
  • Add error message when plotting a model that hasn't been run by @apulsipher in https://github.com/UofUEpiBio/epiworldR/pull/56
  • queuing_off() should give warning if the model doesn't have a queue by @apulsipher in https://github.com/UofUEpiBio/epiworldR/pull/54
  • Add verbose_on/off functions to lfmcmc to enable progress bar by @apulsipher in https://github.com/UofUEpiBio/epiworldR/pull/63
  • Flesh out the LFMCMC vignette by @apulsipher in https://github.com/UofUEpiBio/epiworldR/pull/60
  • Renaming variables for consistency with C++ library by @apulsipher in https://github.com/UofUEpiBio/epiworldR/pull/66
  • Preparing CRAN submission by @gvegayon in https://github.com/UofUEpiBio/epiworldR/pull/67

New Contributors

  • @apulsipher made their first contribution in https://github.com/UofUEpiBio/epiworldR/pull/27

Full Changelog: https://github.com/UofUEpiBio/epiworldR/compare/v0.3-2...v0.6.0.0

Scientific Software - Peer-reviewed - R
Published by apulsipher 11 months ago

epiworldR - CRAN v0.3-2

What's Changed

  • Globalactions class by @gvegayon in https://github.com/UofUEpiBio/epiworldR/pull/4
  • Homogenizing argument names by @gvegayon in https://github.com/UofUEpiBio/epiworldR/pull/5
  • docs: render link in markdown by @Abinashbunty in https://github.com/UofUEpiBio/epiworldR/pull/7
  • Simplifies code and add initial_state by @gvegayon in https://github.com/UofUEpiBio/epiworldR/pull/10
  • Rename actions to events by @gvegayon in https://github.com/UofUEpiBio/epiworldR/pull/12
  • 14 higher contact rate error by @gvegayon in https://github.com/UofUEpiBio/epiworldR/pull/15
  • Adding the epiworld C++ library to exclude from language parsing by @gvegayon in https://github.com/UofUEpiBio/epiworldR/pull/17
  • Adding mixing models (need examples) by @gvegayon in https://github.com/UofUEpiBio/epiworldR/pull/16
  • Adding check to main and cran versions of epiworldRShiny by @gvegayon in https://github.com/UofUEpiBio/epiworldR/pull/21
  • Pre commit by @gvegayon in https://github.com/UofUEpiBio/epiworldR/pull/22
  • Pre commit by @gvegayon in https://github.com/UofUEpiBio/epiworldR/pull/23

Full Changelog: https://github.com/UofUEpiBio/epiworldR/commits/v0.3-2

Scientific Software - Peer-reviewed - R
Published by gvegayon about 1 year ago

epiworldR -

Scientific Software - Peer-reviewed - R
Published by gvegayon almost 2 years ago

epiworldR - v0.3-0

What's Changed

  • docs: render link in markdown by @Abinashbunty in https://github.com/UofUEpiBio/epiworldR/pull/7

New Contributors

  • @Abinashbunty made their first contribution in https://github.com/UofUEpiBio/epiworldR/pull/7

Full Changelog: https://github.com/UofUEpiBio/epiworldR/compare/v0.2-0...v0.3-0

Scientific Software - Peer-reviewed - R
Published by derekmeyer37 over 2 years ago

epiworldR - Second CRAN version

Scientific Software - Peer-reviewed - R
Published by gvegayon over 2 years ago