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https://github.com/alan-turing-institute/mapreader-plant-scivision

Example data for applying MapReader to classification of plant patches and running this model with the Scivision tool

https://github.com/alan-turing-institute/mapreader-plant-scivision

Science Score: 23.0%

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    2 of 3 committers (66.7%) from academic institutions
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    Low similarity (5.9%) to scientific vocabulary

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hut23
Last synced: 10 months ago · JSON representation

Repository

Example data for applying MapReader to classification of plant patches and running this model with the Scivision tool

Basic Info
  • Host: GitHub
  • Owner: alan-turing-institute
  • License: apache-2.0
  • Language: Python
  • Default Branch: main
  • Homepage:
  • Size: 17.3 MB
Statistics
  • Stars: 0
  • Watchers: 4
  • Forks: 2
  • Open Issues: 0
  • Releases: 0
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hut23
Created over 4 years ago · Last pushed almost 2 years ago
Metadata Files
Readme License

README.md

Classification of plant patches/images using MapReader

Example data for applying MapReader to classification of plant patches and running this model with the Scivision tool

Installation

Make sure you have git-lfs installed.

Create a conda environment:

bash conda create -n plant_py38 python=3.8 conda activate plant_py38

Install scivision:

bash pip install scivision pip install jupyter Windows users may need to run the following:

```bash

install rasterio and fiona manually

conda install -c conda-forge rasterio=1.2.10 conda install -c conda-forge fiona=1.8.20

install git

conda install git ```

Running an example notebook

Follow the instructions at: https://github.com/scivision-gallery/plant-phenotyping-classification#how-to-run

Owner

  • Name: The Alan Turing Institute
  • Login: alan-turing-institute
  • Kind: organization
  • Email: info@turing.ac.uk

The UK's national institute for data science and artificial intelligence.

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Last synced: over 2 years ago

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  • Total Commits: 94
  • Total Committers: 3
  • Avg Commits per committer: 31.333
  • Development Distribution Score (DDS): 0.266
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  • Commits: 1
  • Committers: 1
  • Avg Commits per committer: 1.0
  • Development Distribution Score (DDS): 0.0
Top Committers
Name Email Commits
Kasra Hosseini k****i@t****k 69
Evangeline Corcoran 8****n 24
Evangeline Corcoran e****n@t****k 1
Committer Domains (Top 20 + Academic)
turing.ac.uk: 2

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Last synced: over 1 year ago

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  • Total issues: 0
  • Total pull requests: 6
  • Average time to close issues: N/A
  • Average time to close pull requests: 3 months
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  • Total pull request authors: 3
  • Average comments per issue: 0
  • Average comments per pull request: 0.33
  • Merged pull requests: 5
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 0
  • Pull requests: 1
  • Average time to close issues: N/A
  • Average time to close pull requests: 27 days
  • Issue authors: 0
  • Pull request authors: 1
  • Average comments per issue: 0
  • Average comments per pull request: 0.0
  • Merged pull requests: 1
  • Bot issues: 0
  • Bot pull requests: 0
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Top Authors
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  • edwardchalstrey1 (3)
  • evangeline-corcoran (3)
  • kasra-hosseini (2)
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Dependencies

requirements.txt pypi
  • timm *
.github/workflows/ci.yml actions
  • actions/checkout v2 composite
  • actions/setup-python v2 composite