instances
The largest collection of PyTorch image encoders / backbones. Including train, eval, inference, export scripts, and pretrained weights -- ResNet, ResNeXT, EfficientNet, NFNet, Vision Transformer (ViT), MobileNetV4, MobileNet-V3 & V2, RegNet, DPN, CSPNet, Swin Transformer, MaxViT, CoAtNet, ConvNeXt, and more
MF2
MF2: A Collection of Multi-Fidelity Benchmark Functions in Python - Published in JOSS (2020)
Choice-Learn
Choice-Learn: Large-scale choice modeling for operational contexts through the lens of machine learning - Published in JOSS (2024)
effmass
effmass: An effective mass package - Published in JOSS (2018)
SelfEEG
SelfEEG: A Python library for Self-Supervised Learning in Electroencephalography - Published in JOSS (2024)
ENZO
ENZO: An Adaptive Mesh Refinement Code for Astrophysics (Version 2.6) - Published in JOSS (2019)
MODULO
MODULO: A Python toolbox for data-driven modal decomposition - Published in JOSS (2024)
Zoobot
Zoobot: Adaptable Deep Learning Models for Galaxy Morphology - Published in JOSS (2023)
A Framework to Quality Control Oceanographic Data
A Framework to Quality Control Oceanographic Data - Published in JOSS (2020)
Cadabra2
Cadabra2: computer algebra for field theory revisited - Published in JOSS (2018)
terrainr
terrainr: An R package for creating immersive virtual environments - Published in JOSS (2022)
adrt
adrt: approximate discrete Radon transform for Python - Published in JOSS (2023)
GeophysicalFlows.jl
GeophysicalFlows.jl: Solvers for geophysical fluid dynamics problems in periodic domains on CPUs & GPUs - Published in JOSS (2021)
SweetBean
SweetBean: A declarative language for behavioral experiments with human and artificial participants - Published in JOSS (2025)
PyXAB - A Python Library for $\mathcal{X}$-Armed Bandit and Online Blackbox Optimization Algorithms
PyXAB - A Python Library for $\mathcal{X}$-Armed Bandit and Online Blackbox Optimization Algorithms - Published in JOSS (2024)
mosartwmpy
mosartwmpy: A Python implementation of the MOSART-WM coupled hydrologic routing and water management model - Published in JOSS (2021)
Traja
Traja: A Python toolbox for animal trajectory analysis - Published in JOSS (2021)
SimpleFOC
SimpleFOC: A Field Oriented Control (FOC) Library for Controlling Brushless Direct Current (BLDC) and Stepper Motors - Published in JOSS (2022)
imucal - A Python library to calibrate 6 DOF IMUs
imucal - A Python library to calibrate 6 DOF IMUs - Published in JOSS (2022)
pridepy
pridepy: A Python package to download and search data from PRIDE database - Published in JOSS (2025)
ZodiPy
ZodiPy: A Python package for zodiacal light simulations - Published in JOSS (2024)
heatwaveR
heatwaveR: A central algorithm for the detection of heatwaves and cold-spells - Published in JOSS (2018)
Universal Numbers Library
Universal Numbers Library: Multi-format Variable Precision Arithmetic Library - Published in JOSS (2023)
Delve
Delve: Neural Network Feature Variance Analysis - Published in JOSS (2022)
Zoomerjoin
Zoomerjoin: Superlatively-Fast Fuzzy Joins - Published in JOSS (2023)
AnyPyTools
AnyPyTools: A Python package for reproducible research with the AnyBody Modeling System - Published in JOSS (2019)
sorn
sorn: A Python package for Self Organizing Recurrent Neural Network - Published in JOSS (2021)
THzTools
THzTools: data analysis software for terahertz time-domain spectroscopy - Published in JOSS (2024)
quadkeyr
quadkeyr: Tools for converting QuadKey-identified datasets (Microsoft's Bing Maps Tile System) into raster images and analyzing Meta (Facebook) Mobility Data - Published in JOSS (2024)
HiddenMarkovModels.jl
HiddenMarkovModels.jl: generic, fast and reliable state space modeling - Published in JOSS (2024)
NiaARM
NiaARM: A minimalistic framework for Numerical Association Rule Mining - Published in JOSS (2022)
SPEI
SPEI: A Python package for calculating and visualizing drought indices - Published in JOSS (2025)
planetMagFields
planetMagFields: A Python package for analyzing and plotting planetary magnetic field data - Published in JOSS (2024)
epyc
epyc: Computational experiment management in Python - Published in JOSS (2022)
matbench-genmetrics
matbench-genmetrics: A Python library for benchmarking crystal structure generative models using time-based splits of Materials Project structures - Published in JOSS (2024)
REHO
REHO: A Decision Support Tool for Renewable Energy Communities - Published in JOSS (2024)
SLEPLET
SLEPLET: Slepian Scale-Discretised Wavelets in Python - Published in JOSS (2023)
Omniscape.jl
Omniscape.jl: Software to compute omnidirectional landscape connectivity - Published in JOSS (2021)
DynamicalBilliards.jl
DynamicalBilliards.jl: An easy-to-use, modular and extendable Julia package for Dynamical Billiard systems in two dimensions. - Published in JOSS (2017)
MARTINI
MARTINI: Mock Array Radio Telescope Interferometry of the Neutral ISM - Published in JOSS (2024)
GPCERF - An R package for implementing Gaussian processes for estimating causal exposure response curves
GPCERF - An R package for implementing Gaussian processes for estimating causal exposure response curves - Published in JOSS (2024)
A Python Library for Pre- and Post-Processing of DAMASK Simulations
A Python Library for Pre- and Post-Processing of DAMASK Simulations - Published in JOSS (2025)
UncertainSCI
UncertainSCI: A Python Package for Noninvasive Parametric Uncertainty Quantification of Simulation Pipelines - Published in JOSS (2023)
ArrowSpace: introducing Spectral Indexing for vector search
ArrowSpace: introducing Spectral Indexing for vector search - Published in JOSS (2025)
A Python package for homogenization procedures in fiber reinforced polymers
A Python package for homogenization procedures in fiber reinforced polymers - Published in JOSS (2023)
timeseriesflattener
timeseriesflattener: A Python package for summarizing features from (medical) time series - Published in JOSS (2023)
PyVBMC
PyVBMC: Efficient Bayesian inference in Python - Published in JOSS (2023)
cerf
cerf: A Python package to evaluate the feasibility and costs of power plant siting for alternative futures - Published in JOSS (2021)
CoReCon
CoReCon: an open, community-powered collection of Reionization constraints - Published in JOSS (2023)
pDEMtools
pDEMtools: conveniently search, download, and process ArcticDEM and REMA products - Published in JOSS (2024)
elapid
elapid: Species distribution modeling tools for Python - Published in JOSS (2023)
Emiproc
Emiproc: A Python package for emission inventory processing - Published in JOSS (2025)
pyGCodeDecode
pyGCodeDecode: A Python package for time-accurate GCode simulation in material extrusion processes - Published in JOSS (2024)
osmapiR
osmapiR: An 'OpenStreetMap API' implementation for R - Published in JOSS (2024)
mutyper
mutyper: assigning and summarizing mutation types for analyzing germline mutation spectra - Published in JOSS (2023)
CGC
CGC: a Scalable Python Package for Co- and Tri-Clustering of Geodata Cubes - Published in JOSS (2022)
pivmet
pivmet: an R package proposing pivotal methods for consensus clustering and mixture modelling - Published in JOSS (2024)
superblockify
superblockify: A Python Package for Automated Generation, Visualization, and Analysis of Potential Superblocks in Cities - Published in JOSS (2024)
BoARIO
BoARIO: A Python package implementing the ARIO indirect economic cost model - Published in JOSS (2024)
Empirical
Empirical: A scientific software library for research, education, and public engagement - Published in JOSS (2024)
PyMSM
PyMSM: Python package for Competing Risks and Multi-State models for Survival Data - Published in JOSS (2022)
MiscMetabar
MiscMetabar: an R package to facilitate visualization and reproducibility in metabarcoding analysis - Published in JOSS (2023)
BayesO
BayesO: A Bayesian optimization framework in Python - Published in JOSS (2023)
Ambit – A FEniCS-based cardiovascular multi-physics solver
Ambit – A FEniCS-based cardiovascular multi-physics solver - Published in JOSS (2024)
Shapelets
Shapelets: A Python package implementing shapelet functions and their applications - Published in JOSS (2024)
ProbNumDiffEq.jl
ProbNumDiffEq.jl: Probabilistic Numerical Solvers for Ordinary Differential Equations in Julia - Published in JOSS (2024)
pypromice
pypromice: A Python package for processing automated weather station data - Published in JOSS (2023)
PythonicDISORT
PythonicDISORT: A Python reimplementation of the Discrete Ordinate Radiative Transfer package DISORT - Published in JOSS (2024)
PyBCI
PyBCI: A Python Package for Brain-Computer Interface (BCI) Design - Published in JOSS (2023)
ReferenceSeeker
ReferenceSeeker: rapid determination of appropriate reference genomes - Published in JOSS (2020)
Af-analysis
Af-analysis: a Python package for Alphafold analysis - Published in JOSS (2025)
Fast Resampling and Monte Carlo Methods in Python
Fast Resampling and Monte Carlo Methods in Python - Published in JOSS (2023)
verdata
verdata: An R package for analyzing data from the Truth Commission in Colombia - Published in JOSS (2024)
The Spreadsheet Energy System Model Generator (SESMG)
The Spreadsheet Energy System Model Generator (SESMG): A tool for the optimization of urban energy systems - Published in JOSS (2023)
biopeaks
biopeaks: a graphical user interface for feature extraction from heart- and breathing biosignals - Published in JOSS (2020)
quickBayes
quickBayes: An analytical approach to Bayesian marginal likelihoods - Published in JOSS (2025)
GaussianRandomFields.jl
GaussianRandomFields.jl: A Julia package to generate and sample from Gaussian random fields - Published in JOSS (2023)
Pyafscgap.org
Pyafscgap.org: Open source multi-modal Python-based tools for NOAA AFSC RACE GAP - Published in JOSS (2023)
rdflib
RDFLib is a Python library for working with RDF, a simple yet powerful language for representing information.
PlanetMapper
PlanetMapper: A Python package for visualising, navigating and mapping Solar System observations - Published in JOSS (2023)
bayes-toolbox
bayes-toolbox: A Python package for Bayesian statistics - Published in JOSS (2023)
idf-analysis
idf-analysis: Heavy rainfall intensity as a function of duration and return period - Published in JOSS (2025)
modisfast
modisfast: An R package for fast and efficient access to MODIS, VIIRS and GPM Earth Observation data - Published in JOSS (2024)
UQTestFuns
UQTestFuns: A Python3 library of uncertainty quantification (UQ) test functions - Published in JOSS (2023)
dantro
dantro: a Python package for handling, transforming, and visualizing hierarchically structured data - Published in JOSS (2020)
PYDAQ
PYDAQ: Data Acquisition and Experimental Analysis with Python - Published in JOSS (2023)
TipToft
TipToft: detecting plasmids contained in uncorrected long read sequencing data - Published in JOSS (2019)
FastVPINNs
FastVPINNs: An efficient tensor-based Python library for solving partial differential equations using hp-Variational Physics Informed Neural Networks - Published in JOSS (2024)
HW2D
HW2D: A reference implementation of the Hasegawa-Wakatani model for plasma turbulence in fusion reactors - Published in JOSS (2023)
signnet
signnet: An R package for analyzing signed networks - Published in JOSS (2023)
Bodge
Bodge: Python package for efficient tight-binding modeling of superconducting nanostructures - Published in JOSS (2024)
CADET-Core 5.0
CADET-Core 5.0: High-Performance Solver for Advanced Biotechnology Process Modeling - Published in JOSS (2025)
mcsm-benchs: Benchmarking methods for multi-component signal processing
mcsm-benchs: Benchmarking methods for multi-component signal processing - Published in JOSS (2025)