https://github.com/c-martinez/nlrse-survey-figures
Figures for blog post on NL-RSE 2023 survey
https://github.com/coljac/decomment
Utility that removes comments from a source file.
https://github.com/ceresbarros/biomass_borealdataprep
Module to parameterize the Landis Biomass Succession Model in R, for the Canadian Boreal forest
https://github.com/astanabe/raxml-ng
RAxML Next Generation: faster, easier-to-use and more flexible
https://github.com/collab4exanbody/onika
Component based programming HPC software platform to build numerical simulation codes
rso-framework
A computational framework for contradiction-preserving logic that treats paradoxes as fundamental building blocks rather than logical failures. Includes formal mathematical verification, quantum mechanics applications, and consciousness modeling with 7M+ operations/second performance.
https://github.com/cgosmeyer/learning_machinelearning
Stores my notes and Jupyter Notebooks from "Introduction to Machine Learning" by Andreas C. Muller & Sarah Guido.
https://github.com/conect2ai/etfa2025-mst-mpt
This repository contains the code implementation of MSTEDARLS and MPTEDARLS proposed at the IEEE ETFA 2025 conference.
Enhancing short-read sequencing simulation: Updates to NEAT
Enhancing short-read sequencing simulation: Updates to NEAT - Published in JOSS (2026)
https://github.com/coljac/condor_autogen
Python tools to automate as much of the Condor 2 landscape generation as possible.
https://github.com/certara/mlcov
R package for selection of covariate effects using ML
https://github.com/coneonachair/cc-engine-1
Our very own game engine probably wont come out for a while
https://github.com/collab4exanbody/doc_hippolbm
Documentation of the hipoLBM code