https://github.com/boyle-lab/haplotaglr • Science 39%

A tool for phasing long-read sequencing results.

https://github.com/boyle-lab/boyle-lab.github.io • Science 26%

https://github.com/boyle-lab/onramp-web-app • Science 13%

https://github.com/boyle-lab/hmmstr_depreciated • Science 23%

https://github.com/boyle-lab/sempl • Science 13%

C++ implementation of the SEM algorithm

https://github.com/boyle-lab/nanopal-and-cas9-targeted-enrichment-pipelines • Science 23%

The pipelines for the project 'Cas9 targeted enrichment of mobile elements using nanopore sequencing', including NanoPal and Cleavage-site analysis

https://github.com/boyle-lab/uncalled • Science 23%

Raw nanopore signal mapper that enables real-time targeted sequencing

https://github.com/boyle-lab/porechop • Science 10%

adapter trimmer for Oxford Nanopore reads

https://github.com/boyle-lab/mapgl • Science 23%

Phylogenetic mapping of DNA element gain and loss using multiple outgroup species.

https://github.com/boyuren158/csl-gen • Science 26%

https://github.com/boyuren158/ed-perm • Science 26%

https://github.com/bozenne/tutorial-dagstat2025-gpc • Science 26%

https://github.com/bpbond/spatialdata • Science 36%

Spatial data examples

https://github.com/bpbond/licorsc • Science 13%

Convert JSON downloads from a LI-COR smart chamber into a data frame

https://github.com/bpbond/millennial • Science 13%

This is a repository for the newly developed Millennial model

https://github.com/bpbond/soildatar • Science 10%

This is an R package that haromonizes some digitial soil repositories.

https://github.com/bpbond/ipcc-efdb-integration • Science 10%

https://github.com/bpbond/grossmethane • Science 10%

code for processing gross methane production and consumption in upland soil incubations

https://github.com/bpbond/forte-subcanopy-phys • Science 10%

Subcanopy leaf physiological data integration and analysis, FoRTE 2018

https://github.com/bptlab/mantichor-share • Science 13%