https://github.com/benlansdell/byol-pytorch • Science 10%

Implementation of "Bootstrap Your Own Latent" self-supervised learning, from Deepmind, in Pytorch

https://github.com/benlansdell/caiman • Science 23%

Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike deconvolution and result visualization.

https://github.com/benlansdell/biogpt • Science 13%

https://github.com/benlansdell/a-soid • Science 41%

An active learning platform for expert-guided, data efficient discovery of behavior.

https://github.com/benmaier/difflimagg • Science 13%

Diffusion-limited aggregation

https://github.com/benmaier/grayscott-js • Science 13%

Gray-Scott system in JavaScript, sadly without webGL support and hence a bit slow

https://github.com/benmaier/vaccontrib • Science 10%

Quantifying the contributions vaccinated individuals make to the reproduction number

https://github.com/benmaier/sixdegrees • Science 13%

Sample from a variety of small-world network models in Python and C++. This includes a model with modular hierarchical community structure.

https://github.com/benmaier/circleplot • Science 13%

introducing plot to illustrate interaction parameters of infectious diseases with frequency

https://github.com/benmaier/species-overlap • Science 13%

Compute incidence and abundance based overlaps of species in different ponds in a fast manner using linear algebra. Works with parallel support.

https://github.com/benmaier/benmaier.github.io • Science 13%

https://github.com/benmaier/parmscan • Science 13%

Provide tools to plot parameter scan results that are wrapped up in a high-dimensional numpy array

https://github.com/benmaier/ljhouses • Science 13%

C++-based Python package to efficiently simulate 2D Lennard-Jones spheres in an external potential

https://github.com/benmaier/sir-outbreak-size • Science 13%

Code to analyze new heuristics for estimating the outbreak size in SIR-type models

https://github.com/benmaier/buehne • Science 13%

Ambient track made in Sonic Pi

https://github.com/benmaier/bfmaierfbnetwork • Science 13%

Facebook friendship network of author B.F. Maier with himself removed

https://github.com/benmaier/iwasntlying • Science 13%

https://github.com/benmaier/bfmdummypackage • Science 13%

A dummy package that contains the structure I use for Python packages.

https://github.com/benmaier/degree-preserving-randomization • Science 13%

Randomizes a network provided by an edge list without self links and without duplicate links

https://github.com/benmaier/ouprocess • Science 13%

Simulates an Ornstein-Uhlenbeck process in periodic boundary conditions.