graphsim
graphsim: An R package for simulating gene expression data from graph structures of biological pathways - Published in JOSS (2020)
Netgraph
Netgraph: Publication-quality Network Visualisations in Python - Published in JOSS (2023)
OApackage
OApackage: A Python package for generation and analysis of orthogonal arrays, optimal designs and conference designs - Published in JOSS (2019)
spgrep
spgrep: On-the-fly generator of space-group irreducible representations - Published in JOSS (2023)
fractopo
fractopo: A Python package for fracture network analysis - Published in JOSS (2023)
gym-electric-motor (GEM)
gym-electric-motor (GEM): A Python toolbox for the simulation of electric drive systems - Published in JOSS (2021)
AtlasReader
AtlasReader: A Python package to generate coordinate tables, region labels, and informative figures from statistical MRI images - Published in JOSS (2019)
BibDedupe
BibDedupe: An Open-Source Python Library for Bibliographic Record Deduplication - Published in JOSS (2024)
PyCPD
PyCPD: Pure NumPy Implementation of the Coherent Point Drift Algorithm - Published in JOSS (2022)
Monte Carlo / Dynamic Code (MC/DC)
Monte Carlo / Dynamic Code (MC/DC): An accelerated Python package for fully transient neutron transport and rapid methods development - Published in JOSS (2024)
Tools21cm
Tools21cm: A python package to analyse the large-scale 21-cm signal from the Epoch of Reionization and Cosmic Dawn - Published in JOSS (2020)
egobox, a Rust toolbox for efficient global optimization
egobox, a Rust toolbox for efficient global optimization - Published in JOSS (2022)
Stingray 2
Stingray 2: A fast and modern Python library for spectral timing - Published in JOSS (2024)
DataInterpolations.jl
DataInterpolations.jl: Fast Interpolations of 1D data - Published in JOSS (2024)
Blimpy
Blimpy: Breakthrough Listen I/O Methods for Python - Published in JOSS (2019)
sjmisc
sjmisc: Data and Variable Transformation Functions - Published in JOSS (2018)
see
see: An R Package for Visualizing Statistical Models - Published in JOSS (2021)
PyPulseq
PyPulseq: A Python Package for MRI Pulse Sequence Design - Published in JOSS (2019)
EPyT
EPyT: An EPANET-Python Toolkit for Smart Water Network Simulations - Published in JOSS (2023)