https://github.com/biodataanalysisgroup/kmeranalyzer
An alignment-free method capable of processing and counting k-mers in a reasonable time, while evaluating multiple values of the k parameter concurrently.
https://github.com/biodatafuse/biohackarvix-2024
Publication summarizing the work done ELIXIR Biohackathon 2024
https://github.com/biodiversitydata-se/biologging-sensor-client
SBDI Biologging webclient portal, using the biologging-API
https://github.com/biodiversitydata-se/biologging-sensor-datamodel
Datamodel documentation of the Biologging sensor project
https://github.com/biodiversitydata-se/biodiversity-analysis-tools
Providing workflows and tools for Swedish biodiversity data: from data access, data handling and organisation, to analysis.
https://github.com/biodiversitydata-se/coidb
A small python package for downloading and processing metabarcoding references
https://github.com/biodiversitydata-se/unite-shinfo
Files for data repository with SH information from UNITE databases
https://github.com/biodiversitydata-se/sbdi-gtdb
Files for the SBDI Sativa curated GTDB 16S sequence files
https://github.com/biodivhealth/sitetool
A tool for quantitative site selection.
https://github.com/biodivhealth/enfa
Functions to performa an Environmental Niche Factor Analysis
https://github.com/biodivhealth/bivariate_maps
This is a simple but flexible toolkit for visualizing spatial bivariate relationships