brats • Science 67%

Providing top performing algorithms from the Brain Tumor Segmentation (BraTS) challenges.

https://github.com/broadinstitute/adapt-seq-design • Science 26%

Predictive models and datasets for predicting diagnostic activity from sequences.

eventdisplay_v4 • Science 54%

A reconstruction and analysis pipeline for VERITAS.

https://github.com/broadinstitute/gatk-native-bindings • Science 26%

GATK Native Bindings Repository

https://github.com/broadinstitute/lunaris • Science 26%

Lunaris reads and munges data from block-gzipped, location-sorted, tabix-indexed files on Google Cloud.

https://github.com/broadinstitute/celligner2 • Science 36%

A new version of the celligner package using VAEs. Inspired from the Theis lab's scArches.

https://github.com/broadinstitute/gtex-ashg2017-workshop • Science 13%

https://github.com/ceresbarros/trophicnetrobwf • Science 26%

Contains the workflow code used in Box 3 of Dansereau et al. in prep

asreview-dory • Science 67%

Official extension for ASReview LAB enabling state-of-the-art NLP models with dense embeddings and deep learning architectures. Ideal for systematic reviews where lightweight models fall short.

https://github.com/thofma/tally.jl • Science 13%

Counting things in julia

https://github.com/demianhj/matterport • Science 10%

Matterport3D is a pretty awesome dataset for RGB-D machine learning tasks :)

https://github.com/ceresbarros/biomass_speciesparameters • Science 18%

https://github.com/broadinstitute/regional_missense_constraint • Science 57%

Code to calculate regional missense constraint

https://github.com/c-martinez/nhc-queries • Science 13%

Natural History Collections SPARQL Queries

musescore-musicxml • Science 44%

Project to complete MusicXML support in MuseScore

https://github.com/bioconductor-source/rnbeads • Science 13%

thzpy • Science 26%

A user friendly scientific computing library for processing THz time domain spectroscopy data.

https://github.com/ceri-krisp/ceri-fc-dengue-forecasting • Science 26%

https://github.com/52north/matlab-connector • Science 26%

Matlab function execution on (pooled) remote Matlab instances.

thannxai • Science 26%

ThannxAI is a modular toolkit for AI prompt engineering, cultural adaptation (Thai-English), and narrative generation. It includes pre-built templates, automation scripts, and sample outputs for content creators, designers, and AI developers.