Updated 10 months ago

variation-normalization • Rank 14.1 • Science 77%

Services and guidelines for normalizing variants

Biology Computer Science (44%)
Updated 10 months ago

aimsim • Rank 16.0 • Science 75%

A Python toolbox to work with molecular similarity

Updated 10 months ago

ampform • Rank 14.0 • Science 77%

Automatically generate symbolic amplitude models for Partial Wave Analysis

Updated 10 months ago

movement • Rank 14.0 • Science 77%

A Python toolbox for analysing animal body movements across space and time

Updated 10 months ago

eazy • Rank 14.0 • Science 77%

Pythonic photometric redshift tools based on EAZY

Scientific Software
Updated 10 months ago

SSMSE — Peer-reviewed • Rank 6.0 • Science 85%

SSMSE: An R package for Management Strategy Evaluation with Stock Synthesis Operating Models - Published in JOSS (2023)

Earth and Environmental Sciences (40%)
Scientific Software · Peer-reviewed
Updated 8 months ago

PhysioLabXR: A Python Platform for Real-Time, Multi-modal, Brain–Computer Interfaces and Extended Reality Experiments • Rank 4.0 • Science 87%

PhysioLabXR: A Python Platform for Real-Time, Multi-modal, Brain–Computer Interfaces and Extended Reality Experiments - Published in JOSS (2024)

Updated 10 months ago

MadNLP • Rank 14.0 • Science 77%

A solver for nonlinear programming with GPU support

Updated 10 months ago

pygeohydro • Rank 13.9 • Science 77%

A part of HyRiver software stack for accessing hydrology data through web services

Updated 10 months ago

cheminformatics-microservice • Rank 5.9 • Science 85%

This set of essential and valuable microservices is designed to be accessed via API calls to support cheminformatics.

Updated 10 months ago

numexpr • Rank 31.9 • Science 59%

Fast numerical array expression evaluator for Python, NumPy, Pandas, PyTables and more

Scientific Software
Updated 10 months ago

bonsai_ipcc - a Python package for the calculation of national greenhouse gas inventories — Peer-reviewed • Rank 3.9 • Science 87%

bonsai_ipcc - a Python package for the calculation of national greenhouse gas inventories - Published in JOSS (2024)

Physics (40%)
Scientific Software · Peer-reviewed
Updated 10 months ago

speasy • Rank 13.9 • Science 77%

Space Physics made EASY! A simple Python package to deal with main Space Physics WebServices (CDA,SSC,AMDA,..)

Updated 7 months ago

EvoMaster: A Search-Based System Test Generation Tool • Rank 3.9 • Science 87%

EvoMaster: A Search-Based System Test Generation Tool - Published in JOSS (2021)

Scientific Software
Updated 10 months ago

pyEQL — Peer-reviewed • Rank 13.9 • Science 77%

pyEQL: A Python interface for water chemistry - Published in JOSS (2024)

Materials Science Engineering
Scientific Software · Peer-reviewed
Updated 10 months ago

rosella • Rank 13.9 • Science 77%

Metagenomic Binning Algorithm

Updated 10 months ago

ldtk • Rank 13.9 • Science 77%

Python toolkit for calculating stellar limb darkening profiles and model-specific coefficients using the stellar atmosphere spectrum library by Husser et al. (2013). Described in Parviainen & Aigrain, MNRAS 453, 3821–3826 (2015).

Updated 10 months ago

deeplabcut-live • Rank 13.9 • Science 77%

SDK for running DeepLabCut on a live video stream

Updated 10 months ago

sepia • Rank 5.8 • Science 85%

Simulation-Enabled Prediction, Inference, and Analysis: physics-informed statistical learning.

Updated 4 months ago

SEPARATE: Storm Event Partitioning And Rainfall Analytics for Tipping-bucket rain gauge data Evaluation • Rank 3.8 • Science 87%

SEPARATE: Storm Event Partitioning And Rainfall Analytics for Tipping-bucket rain gauge data Evaluation - Published in JOSS (2026)