https://github.com/danymukesha/neuro.gen.predict
A Genetic Risk Assessment Tool for Alzheimer's Disease.
https://github.com/damar-wicaksono/active_subspaces
Python Active-subspaces Utility Library
https://github.com/danymukesha/pleior
Identify, analyze and interpret pleiotropic genetic variants (SNPs associated with multiple traits and diseases) using GWAS data, with a focus on understanding shared biological mechanisms.
https://github.com/andleb/aoc18
Advent of Code 2018 solutions to all problems - actual competition code.
https://github.com/danymukesha/mwbenchr
We developed a tool that provides a user-friendly interface to the Metabolomics Workbench REST APIs. It will simplify access to metabolomics data for users.
https://github.com/danymukesha/mrforad
an R package for performing Mendelian Randomization analyses using Alzheimer’s disease GWAS data. It supports custom summary statistics, SNP harmonization, MR methods (IVW, Egger, median), and integrates with MR-Base and NIAGADS repositories.