Updated 9 months ago

https://github.com/brendel-group/cl-ica • Science 10%

Code for the paper "Contrastive Learning Inverts the Data Generating Process".

Updated 9 months ago

https://github.com/brendel-group/compositional-ood-generalization • Science 10%

Official code for the paper "Compositional Generalization from First Principles" (NeurIPS 2023)

Updated 9 months ago

https://github.com/brentp/vembrane-benchmark • Science 10%

benchmark workflow for vcfexpress paper

Updated 9 months ago

https://github.com/brentp/rust-bio • Science 10%

This library provides implementations of many algorithms and data structures that are useful for bioinformatics. All provided implementations are rigorously tested via continuous integration.

Updated 9 months ago

https://github.com/brentp/bedder-docs • Science 26%

documentation for bedder in mkdocs

Updated 9 months ago

https://github.com/brentp/hts-nim-tools • Science 13%

useful command-line tools written to showcase hts-nim

Updated 9 months ago

https://github.com/brentp/blosc2-nim • Science 13%

nim language wrapper for the blosc2 compression libray.

Updated 9 months ago

https://github.com/brentp/cqf-nim • Science 13%

nim wrapper for counting quotient filter

Updated 9 months ago

https://github.com/brentp/rstuff • Science 10%

R stuff I wrote

Updated 9 months ago

https://github.com/brentp/polars-learn • Science 13%

learn rust polars

Updated 9 months ago

https://github.com/brentp/nim-gzfile • Science 13%

simple reader and writer for gzipped (and regular) files

Updated 9 months ago

https://github.com/brentp/go-blosc • Science 13%

go wrapper for blosc (blocked number compression with fast random access)

Updated 9 months ago

https://github.com/brentp/oodles • Science 13%

oodles of bioinformatics tools

Updated 9 months ago

https://github.com/brentp/hileup • Science 13%

horizontal pileup

Updated 9 months ago

https://github.com/brentp/tnsv • Science 23%

add true-negative SVs from a population callset to a truth-set.

Updated 9 months ago

https://github.com/brentp/rare-disease-wf • Science 36%

(WIP) best-practices workflow for rare disease

Updated 9 months ago

https://github.com/brentp/ggd-hg38-recipes • Science 13%

data recipes for hg38