https://github.com/brendel-group/cl-ica
Code for the paper "Contrastive Learning Inverts the Data Generating Process".
https://github.com/brendel-group/compositional-ood-generalization
Official code for the paper "Compositional Generalization from First Principles" (NeurIPS 2023)
https://github.com/brentkaplan/beezdiscounting
Behavioral Economic Easy Discounting
https://github.com/brentp/vembrane-benchmark
benchmark workflow for vcfexpress paper
https://github.com/brentp/rust-bio
This library provides implementations of many algorithms and data structures that are useful for bioinformatics. All provided implementations are rigorously tested via continuous integration.
https://github.com/brentp/hts-nim-tools
useful command-line tools written to showcase hts-nim
https://github.com/brentp/blosc2-nim
nim language wrapper for the blosc2 compression libray.
https://github.com/brentp/nim-gzfile
simple reader and writer for gzipped (and regular) files
https://github.com/brentp/go-blosc
go wrapper for blosc (blocked number compression with fast random access)
https://github.com/brentp/tnsv
add true-negative SVs from a population callset to a truth-set.
https://github.com/brentp/rare-disease-wf
(WIP) best-practices workflow for rare disease