Projects

Updated 6 months ago

modules • Rank 12.5 • Science 49%

Repository to host tool-specific module files for the Nextflow DSL2 community!

dsl2 modules nextflow nf-core nf-test pipelines workflows

Updated 6 months ago

germline-structuralv-nf • Science 57%

Germline structural variant calling pipeline for short read WGS datasets

annotsv australian-biocommons bam bioinformatics dsl2 genomics germline-variant-calling manta nextflow ngs pipeline smoove structural-variants survivor tiddit workflow

Updated 6 months ago

https://github.com/cnr-ibba/nf-neestimator • Science 13%

A nextflow pipeline for Current Effective Population Size (Ne) calculations with bootstrapping

bootstrap current dsl2 effective neestimator nextflow-pipeline pgdspider2 pipeline plink population size

Updated 6 months ago

https://github.com/australianbiocommons/nextflow_dsl2_template • Science 13%

Template for creating Nextflow DSL2 pipelines

australian-biocommons bioinformatics dsl2 nextflow nextflow-pipeline pipeline reproducibility template workflow workflows

Updated 6 months ago

nf-modules • Science 57%

Custom Nextflow DSL2 modules

dsl2 modules nextflow nextflow-modules

Updated 6 months ago

https://github.com/cfsan-biostatistics/nowayout • Science 26%

nowayout is a super-fast automated software pipeline for taxonomic classification of Eukaryotic mitochondrial reads.

bioinformatics dsl2 metagenomics mitochondrial nextflow nextflow-workflow

ecosyste.ms

Data

Tools

Indexes

Applications

Experiments

Open Source Science

modules • Rank 12.5 • Science 49%

germline-structuralv-nf • Science 57%

https://github.com/cnr-ibba/nf-neestimator • Science 13%

https://github.com/australianbiocommons/nextflow_dsl2_template • Science 13%

nf-modules • Science 57%

https://github.com/cfsan-biostatistics/nowayout • Science 26%