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Open Source Science

Updated 6 months ago

bigsdb • Rank 7.2 • Science 36%

Bacterial Isolate Genome Sequence Database (BIGSdb): A platform for gene-by-gene bacterial population annotation and analysis.

Updated 6 months ago

grapetree • Rank 12.0 • Science 23%

GrapeTree is a fully interactive, tree visualization program, which supports facile manipulations of both tree layout and metadata. Click the first link to launch: https://achtman-lab.github.io/GrapeTree/MSTree_holder.html

Updated 6 months ago

cronology • Science 36%

cronology is an automated workflow for Cronobacter whole genome sequence assembly, subtyping and isolate clustering based on NCBI Pathogen Detection Project for Cronobacter.