GitHub
BiGGer
BiGGer: A Model Transformation Tool written in Java for Bigraph Rewriting in GrGen.NET - Published in JOSS (2024)
MousebreedeR
MousebreedeR: A novel software to assist in the design of breeding schema for complex genotypes of experimental organisms - Published in JOSS (2024)
SpiDy.jl
SpiDy.jl: open-source Julia package for the study of non-Markovian stochastic dynamics - Published in JOSS (2024)
Anime
Anime: Atmospheric and Instrument Models in the Measurement Equation - Published in JOSS (2024)
agweather-qaqc
agweather-qaqc: An Interactive Python Package for Quality Assurance and Quality Control of Daily Agricultural Weather Data and Calculation of Reference Evapotranspiration - Published in JOSS (2024)
GIRFReco.jl
GIRFReco.jl: An Open-Source Pipeline for Spiral Magnetic Resonance Image (MRI) Reconstruction in Julia - Published in JOSS (2024)
goFlux
goFlux: A user-friendly way to calculate GHG fluxes yourself, regardless of user experience - Published in JOSS (2024)
https://github.com/lynn-miller/lfmc_from_modis
Live fuel moisture content estimation from MODIS: a deep learning approach
MicroTracker.jl
MicroTracker.jl: A Julia package for microbot research - Published in JOSS (2024)
NOMAD
NOMAD: A distributed web-based platform for managing materials science research data - Published in JOSS (2023)
RelativisticDynamics.jl
RelativisticDynamics.jl: Relativistic Spin-Orbital Dynamics in Julia - Published in JOSS (2023)
brains-py, A framework to support research on energy-efficient unconventional hardware for machine learning
brains-py, A framework to support research on energy-efficient unconventional hardware for machine learning - Published in JOSS (2023)
PyBullet Industrial
PyBullet Industrial: A process-aware robot simulation - Published in JOSS (2023)
drc-news-corpus
DRC News Corpus : Towards a scalable and intelligent system for Congolese News curation
hyteg
HyTeG (Hybrid Tetrahedral Grids) is a C++ framework for large scale high performance finite element simulations based on (but not limited to) geometric multigrid. This is a mirror of the official https://i10git.cs.fau.de/hyteg/hyteg. Please create Issues there!
ospx
Extension package to farn, adding support to build OSP (co-)simulation cases using functional mockup units (FMUs).
treemap
Pretty treemap with memory efficient input streaming and output streaming for the SVG image
thread-chunks
A python package for performing memory intensive computations in parallel using chunks and checkpointing.
tb-lod-ttp
This repository will hold all of the code necessary to recreate the analyses presented in "Analysis of time-to-positivity data in tuberculosis treatment studies: Identifying a new limit of quantification" by Dufault et al published in the International Journal of Antimicrobial Agents (2025).
nifreeze
A flexible framework for volume-wise artifact estimation and correction across multiple 4D neuroimaging modalities (diffusion MRI, functional MRI, and PET)
edirom-online
Edirom Online is a tool for presenting historical-critical music editions in digital form.
extra-sorted-array
A sorted array is a collection of values, arranged in an order.
crisprzip-tool
A GUI for making CRISPR activity predictions with the CRISPRzip model
cohesion-tools
Preprocessing and evaluation scripts for Japanese cohesion analysis
@stanfordspezi/spezi-firebase
Spezi Firebase Abstractions to Develop Spezi-Based Firebase Projects
relatingromanrings_caa2025
rfc3987-syntax
Helper functions to syntactically validate strings according to RFC 3987.
asv
Automatic Source Valuation (ASV) that considers usage of sources in context
yolov5s-ghost-inference-in-cpp-from-scratch
C++ implementation of YOLOv5s-Ghost for object detection, featuring a lightweight neural network with HLS support for FPGA deployment. Performs inference on 640x640 RGB images, with NMS post-processing for 80 COCO classes. Includes Makefile for easy compilation.
tick_surveillance
Bioinformatics pipeline for analysis of amplicon sequencing of tick-associated microbes
blas-ext-base-ndarray-gsum
Compute the sum of all elements in a one-dimensional ndarray.
https://github.com/edoardocostantini/dataverse-uploader
GitHub Action to publish repository content on Dataverse
https://github.com/edoardocostantini/mi-hd
Repository hosting project high-dimensional imputation comparison
blas-ext-base-ndarray-scusum
Compute the cumulative sum of a one-dimensional single-precision floating-point ndarray.
prompt-super
Prompt Super is a fully–featured template prompt that guides large‑language‑model assistants through every stage of academic writing: diagnosis, restructuring, editing, formatting, reproducibility and dissemination.
pyqasm
Python toolkit providing OpenQASM 3 semantic analyzer and utilities for program analysis and compilation.
deeprank-gnn-esm
Graph Network for protein-protein interface including language model features
https://github.com/edoardocostantini/ggmice
Visualize incomplete and imputed data with the R package `ggmice`
listofethicalgooglesearchdorks
A curated list of ethical and safe google search dorks to improve productivity.
https://github.com/edoardocostantini/paper-template
My Rnw template for scientific papers
pucminas-aeds2-assignments
Content developed throughout the Data Structures and Algorithms II course in the second semester of the Computer Science program at PUC Minas, including exercises, activities, and other implementations.
amplicon-nf
Amplicon genome assembly for ARTIC style primer schemes using Nextflow.
quick-start-creating-a-vector-database-for-rag
A playground for vector database exploration using Chroma
lasp-opensearch-data-center
AWS CDK Constructs for creating a data center based around OpenSearch.
qanpcrt
Quality Assurance of Nasopharyngeal Cancer Radiation Therapy Targets (CTV's) using a novel web-based quality assurance application
master-thesis
Repository to store the notebooks used for the development of my master thesis, under the title "From Application to Graduation: A Fair Approach to Predict HEI Admissions and Academic Performance".
liquidsoap
Liquidsoap is a statically typed scripting general-purpose language with dedicated operators and backend for all thing media, streaming, file generation, automation, HTTP backend and more.