https://github.com/biocore/q2-katharoseq • Science 49%

https://github.com/biodivhealth/lf_nigeria_reports • Science 44%

https://github.com/biodivhealth/new_global_maxent • Science 49%

https://github.com/biodt/general-soilgrids-soil-data • Science 49%

Building block for obtaining selected soil data at given location from SoilGrids and derived data sources (Soilgrids REST API, HiHydroSoil map).

https://github.com/biodt/uc-grassland-model • Science 49%

grassland simulation model source code

https://github.com/bioinfomachinelearning/gate • Science 49%

Graph transformer for estimating protein model accuracy

https://github.com/biont-training/hpc-intro-en • Science 44%

https://github.com/biop/qupath-extension-cellpose • Science 57%

an extension that wraps a Cellpose environment such that WSI can be analyzed using Cellpose through QuPath.

https://github.com/biopragmatics/o3 • Science 57%

A repository for the O3 guidelines

https://github.com/bioscan-ml/bioscan-1m • Science 49%

A Step Towards Worldwide Biodiversity Assessment: The BIOSCAN-1M Insect Dataset

https://github.com/biswesh456/bargaining • Science 49%

This repo contains code for the paper Incorporating Autonomous Bargaining Capabilities into E-Commerce Systems which was accepted in ACM IVA 2020.

https://github.com/bitcs-information-retrieval-2021-2022/assignment-description • Science 49%

Description of Final Assignments of Information Retrieval Course 2021-2022

https://github.com/bitstrawber/ddpm • Science 49%

https://github.com/bluebrain/topological_sampling • Science 57%

The analysis pipeline for the topological sampling project

https://github.com/bluebrain/atlas-suite • Science 54%

https://github.com/bluebrain/neurodamus • Science 57%

A BBP Simulation Control application for NEURON

https://github.com/bluebrain/psp-validation • Science 57%

Perform spontaneous minis validations

https://github.com/bluebrain/currentscape • Science 57%

Currentscape is a Python tool enabling scientists to easily plot the currents in electrical neuron models. The code is based on the paper Alonso and Marder, 2019.

https://github.com/bluebrain/cortexetl • Science 57%

https://github.com/bluebrain/astrovascpy • Science 75%

Vasculature blood flow computation and impact of astrocytic endfeet on vessels

https://github.com/bluebrain/atlas-enhancement • Science 57%

Tools to generate flatmaps of brain atlases & code to add barrel and barrel column annotations to Allen Mouse CCFv3

https://github.com/bluebrain/vessmorphovis • Science 57%

A lightweight, interactive, extensible and cross-platform framework for building, visualizing and analyzing vasculature (or blood vessels) morphologies.

https://github.com/bluegreen-labs/swift_cc894 • Science 49%

Analysis of the 19 month flight of juvenile swift CC894

https://github.com/bmcguir2/astromol • Science 49%

https://github.com/bodenmillergroup/scpathology_publication • Science 49%

The Single-Cell Pathology Landscape of Breast Cancer

https://github.com/boniolp/tsadtaxonomy • Science 49%

This application helps users explore and understand the vast array of existing methods, ranging from traditional statistical approaches to modern machine learning algorithms. It visualizes a structured, process-centric taxonomy of anomaly detection techniques, enabling a deeper insight into the research landscape.

https://github.com/borchlab/ibex • Science 49%

Using BCR and expression for sequence embedding

https://github.com/boutproject/hermes-3 • Science 49%

Multifluid drift reduced fluid model

https://github.com/bowang-lab/medsam • Science 46%

Segment Anything in Medical Images

https://github.com/brain-development-and-disorders-lab/mars • Science 57%

Metadatify is an open-source web-based tool to create, manage, and search scientific metadata.

https://github.com/braingeneers/sims-web • Science 49%

Attempt to run SIMS inference in the browser

https://github.com/bramvanroy/mantis • Science 44%

Segmentation interface for the TPR-DB to manually tokenize and sentence segment

https://github.com/bridgedb/wikidata2bridgedb • Science 67%

Creation of BridgeDb mapping databases from Wikidata

https://github.com/bridgeslab/developmental-obesity • Science 57%

https://github.com/britishgeologicalsurvey/ash-model-plotting • Science 57%

Wrapper around Iris Python library for easy plotting of NAME, FALL3D and HYSPLIT model results.

https://github.com/broadinstitute/one-shot-atlas • Science 57%

Siamese Neural Network for anatomical registration

https://github.com/broadinstitute/str-truth-set • Science 57%

Genome-wide tandem repeat (TR) truth set based on the Synthetic Diploid Benchmark [Li et al. 2018]

mmpose_charger • Science 44%

ns3-base-docker • Science 57%

ns-3 installations using Docker

code-of-conduct-initializer • Science 52%

Handles scenarios for missing Code of Conduct or outdated Contributor Covenant version

pymurtree • Science 44%

Python wrapper for the MurTree project

core-r • Science 75%

phasefieldcrystal • Science 44%

edamame • Science 44%

For decision analytic modeling and cost-effectiveness analysis

https://github.com/fgazzelloni/covidcompare • Science 23%

Global COVID-19 Forecast Comparison

emily-sandbox • Science 44%

rae_sandbox • Science 44%

charter • Science 44%

Block Foundation Charter [WIP]

cltd • Science 67%

Manifestly Causal Loop-Tree Duality

group-1 • Science 44%

comp2501-project • Science 44%

Repo placing all the data and rmd used in the project "Twitter influencers' influence on their followers' behaviour"

pmv-si-2023-2-pe1-t3-prosaude • Science 44%

pmv-si-2023-2-pe1-t3-prosaude created by GitHub Classroom

jsruntemp • Science 44%

Simply template to run JavaScript with using export/import etc which need local server. Made with FastApi

yolov5_decoupled • Science 54%

participation-gaps • Science 44%

Using extreme value theory, I show that women are not worse than men at chess, despite what appears to be lopsided ratios at the top level.

stresspose-analysis • Science 44%

Python package for the analysis of data collected during the StressPose study.

neural-additive-models • Science 44%

crambl • Science 44%

https://github.com/fgazzelloni/covid-19 • Science 13%

Novel Coronavirus (COVID-19) Cases, provided by JHU CSSE

osc-qasm • Science 67%

A simple OSC Python interface for executing Qasm code.

outlierdetectionforgeodeticlevelingnetwork • Science 67%

sanim-dev-container • Science 44%

sanim in dev containers

ml_defectdetection • Science 54%

Machine learning models to detect topological defects in biological tissues

tempaqua_app_ios • Science 67%

This mobile phone application facilitates mapping of intermittent streams. It is designed to make field work more efficient and less error-prone.

pmfpredictor-toolkit • Science 49%

A set of tools for the prediction of small molecule - surface potentials of mean force using Tensorflow.

lif_stochastic • Science 44%

code associated with "Dynamics of stochastic integrate-and-fire networks"

roogledocs • Science 54%

Collaborative editing of Google Docs with R scripting

senseflux • Science 65%

Spatially Explicit Nutrient Source Estimate flux (SENSEflux) pathways

laravel-perfect • Science 44%

Laravel

cnn_sar_image_classification • Science 44%

My final undergrad thesis in Aerospace Engineering, aimed to develop a convolutional neural network capable of classifying SAR images of the Amazon Rainforest.

explainable-ai-master-thesis • Science 44%

Master thesis in the field of Explainable AI (XAI)

biomedwaveforms • Science 44%

Visualizing various biomedical waveforms, like EKGs

sigrid-sandbox • Science 44%

lengmorph • Science 54%

A tool to include length scale effects for crystal plasticity using slip distance

data-dashboard-carpentries • Science 44%

cutlass • Science 44%

wflo-optimization • Science 44%

utasrobotprogram • Science 44%

Self-docking Autonomous Vehicle For Agricultural Monitoring And Transport Services

cremma-mss-16 • Science 44%

CREMMA HTR GT for 16th century MSS

figuratenum • Science 44%

Figuratenum is the most comprehensive Python library for figurate numbers, capable of generating up to 233 different sequences across various dimensions and generalizations. Based on the book ‘Figurate Numbers’ (2012) by Elena Deza and Michel Deza.

hypervariables • Science 75%

General variable and Lie group containers with extensive Eigen interoperability for non-linear optimizations.

pymdea • Science 54%

Modified diffusion entropy analysis. Time-series analysis technique developed by the Center for Nonlinear Science at the University of North Texas

yolov5-fusion • Science 54%

fork yolov5

vcnef • Science 54%

Official PyTorch implementation of the Vectorized Conditional Neural Field.

agda-sessions • Science 44%

Learn the Agda basics in three 2-hour sessions.

ads-2024-1-e3-proj-mov-t5-personalcash • Science 44%

ads-2024-1-e3-proj-mov-t5-personalcash created by GitHub Classroom

si-hg • Science 54%

dcf-yolov8 • Science 54%

vestasv27 • Science 44%

Repository containing code used to process data from an operational Vestas V27 wind turbine.

usrse23_stylo2gg • Science 44%

Stylo2gg: Visualizing Reproducible Stylometry

englert-lab • Science 44%

fullweakannotations • Science 54%

array_seis_circle • Science 44%

(work in progress) python package for array seismology methods correcting for a curved wavefront.

mlfp_filter • Science 52%

Europe PMC Machine Learning Filter for Removing False Positives from Dictionary Annotations

gpt-neox • Science 62%

gpt-neoxのフォークです。mainは元に追従させています

UnfoldDecode • Science 67%

dragonforge • Science 54%

dse2023 • Science 49%

Lectures and conference materials for the DSE2023 at the University of Lausanne, Switzerland

tts-model-server • Science 54%

text to speech model accessible through a server-based API to generate vocals from text

multipl-e • Science 62%

A multi-programming language benchmark for LLMs