GitHub
https://github.com/jcallinan/applepicker2024
Example of ApplePicker from Jeremy Gibson Bond's Book on Video Game Programming
https://github.com/jcallinan/oopstackexample2024
An example of OOP and data structures using Node.js and MongoDB with a React front-end.
https://github.com/jcallinan/oopstackexample
Stack example using MongoDB, Node.js and React.
https://github.com/jcbayley/antikythera_holecount
count the number of holes in the scans of the antikythera mechanism
https://github.com/hazboun6/pulsar_timing_school
Learning material for pulsar timing data analysis
niarules
Numerical Association Rule Mining using Population-Based Nature-Inspired Algorithms
https://github.com/hazboun6/pta_forecasts
Various codes used to forecast the sensitivities of PTAs.
https://github.com/fernphy/ferncal
A database of fossils for molecular dating of the fern tree of life
https://github.com/hazboun6/mdc2
A repository of the IPTA Mock Data Challenge datasets.
https://github.com/fernphy/ftol_ms
Code to generate the manuscript "An open and continuously updated fern tree of life (FTOL)"
https://github.com/feroz1gul/ned-project
streamlit, FastAPI, Kafka, Kong, Containers with Docker file and compose file
https://github.com/ferreiraas/ciencia-com-r-consultoria
Ciência com R é direcionado a pesquisadores e alunos de todos os níveis de graduação e pós-graduação da Área de Saúde.
opensoundscape
Open source, scalable software for the analysis of bioacoustic recordings
https://github.com/hazboun6/enterprise
ENTERPRISE (Enhanced Numerical Toolbox Enabling a Robust PulsaR Inference SuitE) is a pulsar timing analysis code, aimed at noise analysis, gravitational-wave searches, and timing model analysis.
PSD: Parallel Finite Element Solver for Continuum Dynamics
PSD: Parallel Finite Element Solver for Continuum Dynamics - Published in JOSS (2026)
pyhctsa: A Python package for highly comparative time-series analysis
pyhctsa: A Python package for highly comparative time-series analysis - Published in JOSS (2026)
https://github.com/ferrite-fem/ferriteinterfaceelements.jl
Interface elements (aka cohesive elements) for Ferrite.jl
https://github.com/fertiglab/spatial_venous_invasion_pdac
Spatial profiling of venous invasion in human pancreatic ductal adenocarcinoma
https://github.com/fertiglab/cogaps
Bayesian MCMC matrix factorization algorithm
https://github.com/hbclab/restingstate
Scripts to preprocess resting state data and extract ROI-ROI correlations and voxel-wise ROI seedmaps
https://github.com/fertiglab/j1798_trial_paper
scripts for the J1798 trial paper
https://github.com/hbclab/jumpstartlearning
Various Resources if you want to learn/work on various projects in the Lab
https://github.com/fertiglab/bayestme
BayesTME: A reference-free Bayesian method for analyzing spatial transcriptomics data
https://github.com/hbclab/projectacuteexercise-cognitivecontrol
Data and related summaries and analyses from acute exercise project comparing effects on two cognitive control tasks.
stars-reproduce-kim-2021
Assessing the computational reproducibility of Kim et al. 2021 as part of STARS.
scottish_statistics_losd
The SPARQL queries used to acquire integrated statistical indicators from the Scottish Linked Open Government Data portal
pandots
PanDots: Pandemic Document Types. Analysis of scientific literature genres during the Covid-19 pandemic
road_map
DeFi Developer roadmap is a curated Developer handbook which includes a list of the best tools for DApps development, resources and references!
dynamont
code-for-simulation-based-active-learning-for-systematic-reviews
Code visualization notebooks for "Simulation-Based Active Learning for Systematic Reviews: A Systematic Review of the Literature"
network_tda_tutorial
This repository is dedicated for the tutorial on network and topological neuroscience.
metagenomics
A Nextflow workflow for QC, evaluation, and profiling of metagenomic samples using short- and long-read technologies
python-schema-matching
A python tool using XGboost and sentence-transformers to perform schema matching task on tables.
llm_simpy_models
The SimPy models and apps generated by LLMs, deployed as a single app.
caloclouds-2
PyTorch implementation of the CaloClouds II model introduced in https://arxiv.org/abs/2309.05704
mpox-kg
Source code and data repository for paper titled "Monkeypox Knowledge Graph: A comprehensive representation embedding chemical entities and associated biology of Monkeypox "
cessda.cdc.aggregator.oai-pmh-repo-handler
Component that provides an OAI-PMH endpoint so that metadata can be harvested by other aggregators
meros
Compact Implementation of Meta - Recognition and EVT Tools for Open-Set Classification
cudamatrixtranspose
Optimizing matrix transposition on GPU with CUDA (University of Trento, Italy)
tiapli-2023-2-communibus
Trabalho Interdisciplinar: Aplicação Interativa - 2023-2 - CommuniBus
ppl-cc-ti1-2023-2-g-problemas-de-habitos-saudaveis
ti-1-ppl-cc-m-20232-problemas-de-habitos-saudaveis created by GitHub Classroom
coryphoideae_species_tree
Palm subfamily Coryhpoideae higher-level systematics
education-app-prototype
A prototype of an app to organize school assignments and classes created in Figma
adaptive_control_steerbywire
MRAC (Model Reference Adaptive Control)+ Input shaping to safely control Steer-By-Wire vehicles.
cudawrappers
C++ wrapper for the Nvidia/HIP C libraries (e.g. CUDA driver, nvrtc, hiprtc, cuFFT, hipFFT, etc.)