GitHub
https://github.com/biodt/uc-ces-recreation
Source code for the Recreational Potential Model for Scotland
ai-news-monitor
Real-time news monitoring dashboard for Tarruck Wheeler's AI Safety Initiative
value-object-pattern
The Value Object Pattern is a Python 🐍 package that streamlines the creation and management of value objects 📦 in your projects. Value objects are immutable, self-validating objects that represent descriptive aspects of the domain with no conceptual identity.
TRANA
A pipeline based on EMU, a taxonomic profiler optimized for long 16S rRNA reads.
quaspy
The Quaspy library for Python for simulating and post-processing various quantum algorithms, including Shor's algorithms and Ekerå–Håstad's variations of Shor's algorithms.
lang-zxx
Finite state and Constraint Grammar based analysers and proofing tools, and language resources for the No linguistic content language
teleop-xr
A Generic Framework to Teleoperate Robots in Augmented Reality (AR) using WebXR
omop-meds
An ETL pipeline for transforming OMOP datasets into the MEDS format using the MEDS-Transforms library.
https://github.com/biodt/general-copernicus-weather-data
Building block for obtaining selected weather data at given location (0.1° x 0.1° spatial resolution) for desired time periods, at hourly resolution, e.g. from Copernicus ERA5-Land dataset
nosparql-query-builder
GUI for building SPARQL queries without requiring knowledge of SPARQL. Inspired by the [Wikidata Query Service](https://query.wikidata.org/).
lffocusmaps
Light field rendering and interpolation algorithm using computation of focus maps on GPU.
https://github.com/datasig-ac-uk/signature_mahalanobis_knn
Methodology for anomaly detection on multivariate streams using path signatures and the variance norm.
TensorOperations.jl
Julia package for tensor contractions and related operations
https://github.com/datejada/private-investor-gep
Private investor generation expansion planning example
github_forklist
:octocat: 🍴️ A list of all my GitHub forks. This project is planned to be fully-automated once automation is ready. This is a personal project of @seanpm2001
eds-book
A computational notebook community for open environmental data science 🌎
https://github.com/datejada/gams-python-matrix-inverse
GAMS code using Embedded Code Facility to calculate matrix inverse with Python
scanscn
A tool to identify small cell neuroendocrine (SCN) features from transcriptomic data.
https://github.com/datejada/generation-expansion-planning-models-jump
Generation Expansion Planning Models in Julia/JuMP
cicognara-printers-marks
Printer's devices (or printer's marks) in the Cicognara collection
https://github.com/datejada/stelmod
stELMOD is a stochastic optimization model to analyze the impact of uncertain wind generation on the dayahead and intraday electricity markets as well as network congestion management. The consecutive clearing of the electricity markets is incorporated by a rolling planning procedure resembling the market process of most European markets.
citizen-expert-snail-prediction
Code used for the paper: Great minds, map alike: Citizen and expert distribution models of schistosome snail hosts in rural west Uganda
irbp.jl
An efficient numerical algorithm for solving the Euclidean projection of a vector onto the nonconvex lp-ball in Julia. Inspired from https://github.com/Optimizater/Lp-ball-Projection
code-and-data-for-the-figures-of-nonlinearity-of-the-fidelity-in-open-qudit-systems
nfhaplotag
Nextflow pipeline for running haplotag software like WhatsHap or longphase
imsrg
In-Medium Similarity Renormalization Group software for nuclear structure calculations. Written in C++, with Python bindings.
mh1dmt
:earth_asia: MH1DMT is inversion software using LM (Levenberg-Marquardt), SVD (Singular Value Decomposition), SA (Simulated Annealing), VFSA (Very Fast Simulated Annealing), and MVFSA (Modified Very Fast Simulated Annealing) of one-dimension magnetotellurics (MT) in MATLAB
slurm-cli-api-proxy-client
Mimics SLURM commands, translating them into SLURM REST API calls
https://github.com/dcan-labs/exampleconfig
Example configuration for prototyping a Swipes for Science app
brain_representations
code repository for paper. "Comparing representations of high-dimensional data with persistent homology: a case study in neuroimaging"
g-adopt
Repository for the development of the Geoscientific ADjoint Optimization PlaTform (G-ADOPT).
esa-pyxel
Mirror/fork of ESA pyxel (https://gitlab.com/esa/pyxel) for personal development
fintech
复旦大学金融科技与数据智能研究室 (Fudan University Fintech and Data Intelligence Laboratory)
org.hipparchus:hipparchus
An efficient, general-purpose mathematics components library in the Java programming language
samntrek
Locally deployable search tool to explore local Salmonella epidemiology in a global context
cl-pandoc-filters
This is a collection of Pandoc filters used by Caltech Library's Digital Library Development Groups
Easy3D
Easy3D: a lightweight, easy-to-use, and efficient C++ library for processing and rendering 3D data - Published in JOSS (2021)
phoenix
🔥🐦🔥PHoeNIx: a platform agnostic pipeline for healthcare-associated and antimicrobial resistant pathogens
pandas-fnma
Cleaner version of pandas v1.5.2 for python3 users who are unable to upgrade to python4
frisbee
Kubernetes-native framework for declarative testing of distributed systems.
time-series-forcasting-benchmark-dataset-preprocessing
Benchmark Datasets for Time Series Forecasting Preprocessing - NASA HTTP Dataset, WorldCup98 Dataset
https://github.com/google-research/weatherbenchx
A modular framework for evaluating weather forecasts
mlflow-auth-gui
A web application that provides a Web GUI to the MLflow Authentication API
ssembatya-etal_2025_submitted_to_applied_energy
Meta repository for data and code associated with the Ssembatya et al. 2025 submission to Applied Energy
rnaseq
RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.
actnow.jl
Files and data to replicate the results of the Act Now series of papers.
geronimo-etal_2024_naturalhazardsreview
Tradeoff analysis for flood adaptation pathways in Ortley Beach, New Jersey
