GitHub
abstract-machine
A haskell implementation of a resource aware abstract machine for a small subset of jsx.
make_github_webpage
Material for the MGSA workshop on creating webpages with Rmd + GitHub
fine-tuned-yolo
This repository is forked from yolov5. The original model is here fine-tuned on a drone detection dataset from kaggle.com
caelum
An academic high-order finite-volume solver for the compressible Euler equations and related problems
psg-si-tiapn-2024-2-therasync
psg-si-tiapn-2024-2-therasync created by GitHub Classroom
diwanalr
diwanalr: An R data analysis package for diffusing-wave spectroscopy - Published in JOSS (2019)
scnapattern
A workflow to calculate SCNA patterns as described in Pesenti et al.
ggparliament
ggparliament: A ggplot2 extension for parliament plots in R - Published in JOSS (2019)
anuga_numpy
This is the master configuration for Anuga using GNU compiler with python NumPy support.
bor
bor: An R Package for Transforming Behavioral Observation Records into Data Matrices - Published in JOSS (2018)
A reusable tree-based web-visualization to browse EDAM ontology, and contribute to it.
A reusable tree-based web-visualization to browse EDAM ontology, and contribute to it. - Published in JOSS (2018)
HelpMe Command Line Helper Utility
HelpMe Command Line Helper Utility - Published in JOSS (2018)
AncesTrim - a tool for trimming complex pedigrees
AncesTrim - a tool for trimming complex pedigrees - Published in JOSS (2017)
2025-08-18-olemiss
Library Carpentry Workshop at the University of Mississippi
analog-circuit-design
Course material for a basic hands-on analog circuit design course with IC emphasis
mpox_ampseq
Mpox_AmpSeq is a custom nextflow-style pipeline for mpox F13L amplicon sequencing. It generates reference-based consensus sequences, variant reports, NextClade outputs including clade designation, and multiple quality control metrics.
lmrrfactory
Automatically generates LMR-R reactions (and mechanisms) according to the user’s choice of Plog, Troe, or Chebyshev sub-formats
cellprofiler-on-terra
Run CellProfiler on Terra. Contains workflows that enable a full end-to-end Cell Painting pipeline.
artist
A differentiable ray tracer using the PyTorch machine-learning framework in Python.
pedestrian-detection-system
Developed a YOLOv5-based pedestrian detection model, optimized for real-time tracking in high-traffic environments, improving detection accuracy and response time.
fitbit-data-pipeline
A pipeline that automate Fitbit OAuth2 authorisation and collects sleep, activity and heart rate data from Fitbit devices
098-efvae-efficient-federated-variational-autoencoder-for-collaborative-filtering
stats-strided-nanvariancepn
Calculate the variance of a strided array ignoring NaN values and using a two-pass algorithm.
matex
Code for extrapolation in materials property prediction as proposed in "Known Unknowns: Out-of-Distribution Property Prediction in Materials and Molecules".
lang-myv
Finite state and Constraint Grammar based analysers and proofing tools, and language resources for the Erzya language
svrstormsig
roseui
Rose UI
constraintlearning.jl
A Julia package for people that love to learn new things about constraints
oscofo
OScofo is a library dedicated to the research of score following in contemporary music contexts.
iohub
Pythonic and parallelizable I/O for N-dimensional imaging data with OME metadata
2025-asr-plms
Exploring the intersection of Ancestral Sequence Reconstruction, Protein Language Models, and Consensus Bias
greenlight-gym2
Reinforcement learning environment for controlling greenhouse crop production systems. The greenhouse dynamics are based on GreenLight..
differential-equations
A high-performance library for numerically solving differential equations in Rust
robot_remote_control
A library for framework independent remote control of semi-autonomous robots. The library is in active development and might change a lot.
mini-callcenter-simulator
Mini Callcenter Simulator simulates a call center and takes into account many parameters not covered by the Erlang C formula.
fowlplay
A notebook to explore the value of sex data buried in the Global Biodiversity Information Facility for ducks
spreadsheet-and-data-files-helper
Helper to read, extract and transform data from Spreadsheet files and Data files
mussel_nitrogen_ms
Data repository for a study conducted near Sapelo Island, GA that quantifies the effects of ribbed mussel presence and density on nitrogen pools and processes
metamodeling-and-control-of-medical-digital-twins_2024
Repository containing the files used in the manuscript entitled: Metamodeling and Control of Medical Digital Twins.
lcadistaloutcomeipw
Simulation package - Latent class analysis with distal outcome using inverse propensity weighting
active-time-theory-quantum-tunneling
Simulation of Quantum Tunneling Dynamics Validates Signatures of Active Time
deepfri-explainability
Explainability methods employed for the DeepFRI protein function algorithm