GitHub
drugdeliverybuongiornopimplefoam
An OpenFOAM's solver for drug delivery and unsteady forced convection heat transfer of nanofluid using the Buongiorno model to consider nanoparticle distribution.
hicup-plus
Hi-C data processing pipeline (with Dragen, HiSAT2, or STAR aligner)
earnings
Equity earnings Python package (confirmed calendar, news articles, earnings transcripts, ...)
fsquadra
Fast detection of repackaged Android applications based on the comparison of resource files included into the package.
tsdetect
TSDetect is an open-source test smell detection tool. TSDetect is available as an IntelliJ plugin and command-line tool.
icse-seip2025-anomaly-detector-public
This repository contains the code implementation for the ICSE SEIP 2025 paper titled "Anomaly Detection in Large-Scale Cloud Systems: An Industry Case and Dataset."
how-to-doc-guidelines
How-to use the Australian BioCommons documentation guidelines
pratical-session-nlp-for-one-health-murdoch-mood
Pratical session NLP For One Health - Murdoch Mood
highlighting-errors-and-correcting-hec-
This code walks the user through the process of correcting training data labels and cutting out erroneous data
eucanscreenwp5_demo_aspire
Demo version for the 2025_02_06 meeting. The tools are shown with an example model and a simple R script.
tiapn-template
Template para a disciplina de TI: APLICAÇÕES PARA PROCESSOS DE NEGÓCIOS
clubes_de_ciencias_sdms
Material for 1 week course in species distribution modeling using R notebooks, MaxEnt, and GIS packages.
perihpx
Implementation of finite element and finite difference approximation of Nonlocal models
pmv-si-2023-2-pe5-t4-t5-grp04
pmv-si-2023-2-pe5-t4-t5-grp04 created by GitHub Classroom
bua-vivo-ontology-extensions
Extensions to VIVO ontologies describing entities in the German academic domain
mapping-pipeline
This repo will combine all the steps of mapping EHR data to the CAPACITY registry in one big docker-compose file
reinforcement-learning-for-scripts-of-tribute
This is the corresponding Github repository of our paper "Training a Reinforcement Learning Agent for Tales of Tribute".
syne-tune
Large scale and asynchronous Hyperparameter and Architecture Optimization at your fingertips.
https://github.com/demoriarty/flash-attention
Fast and memory-efficient exact attention
haarpy
Haarpy is a Python library for the symbolic calculation of Weingarten functions and related averages of unitary matrices sampled uniformly at random from the Haar measure.
stats-strided-smean
Calculate the arithmetic mean of a single-precision floating-point strided array.
leafwaxtools
A package for calculating common indices from plant leaf wax distributions and isotopic data
agent-based-evolutionary-game-dynamics
NetLogo models developed in the book "Agent-Based Evolutionary Game Dynamics"
cmipsummary
A summary paper describing climate science MIP history and evolution
stats-strided-dmaxabssorted
Calculate the maximum absolute value of a sorted double-precision floating-point strided array.
hictkpy
Python bindings for hictk: read and write .cool and .hic files directly from Python
topolow
A physics-inspired R package for robust Euclidean embedding of sparse, non-metric dissimilarity data. Particularly powerful for antigenic cartography and viral evolution tracking, but applicable to any domain with incomplete similarity measurements. Published in *Bioinformatics* (2025).
paidiverpy
Create pipelines for preprocessing image data for biodiversity analysis.
color-perception-task
Perceptual decision-making tasks to examine how the opinions of others change individuals’ basic perceptual processes, i.e., whether social influence can alter perception of colors.
5gc-features
This project provides a comparative analysis of various 5G Core Network (5GC) implementations, focusing on the implemented endpoints and features for each Network Function (NF)
mapseq
This repository provides an end-to-end open source pipeline for the processing of MAPseq (Marker Assisted Programming sequencing) data.
pyfixest
Fast High-Dimensional Fixed Effects Regression in Python following fixest-syntax
msf-proyecto-final
Dinámica y Control del Eje Endocrino en el Síndrome de Cushing
archeo
Bayesian framework for inferring natal kick, ancestral masses and spins of black holes.
qc-partial-charges-amber
Step-by-step procedure for calculating partial atomic charges compatible with the AMBER General Force Field (GAFF), using quantum calculation using the GAMESS software and Antechamber using RESP fitting method.
nianetcae
Designing and constructing convolutional autoencoders using nature-inspired algorithms