GitHub
perennialcrops-gcb
Code to produce the results in the Global Change Biology paper "Assessing temperature-based adaptation limits to climate change of temperate perennial fruit crops"
deploy-to-grading
"Deploy-to-Grading" is a toolchain for automated analysis and grading of programming tasks.
visible_area
This script will show the trend of the visible area of a spherical body such as a planet or star as the altitude above its surface increases
hexa_payload_decoder
A tool to automatically decode and translate any TCP hexa payload data form any language to english.
richardson_compound_wildfire
Codes for generating results and figures from Richardson et al., 'Global increase in wildfire potential from compound fire weather and drought'
playsem_serenderer
PlaySEM Sensory Effects Renderer (SER) is a framework for delivering sensory effects such as wind, smell, vibration, and light to heterogeneous systems. It deals with variability in digital multisensory systems (mainly mulsemedia) allowing the use of different devices, SDKs/APIs, and many protocols to communicate with diversified applications.
luck-and-choice
Choice model estimation for "Luck, choice and responsibility — An experimental study of fairness views"
srfd-bayes
[Nature Communications] Tumor fractions deciphered from circulating cell-free DNA methylation for cancer early diagnosis
an-information-retrieval-approach-to-building-datasets-for-hate-speech-detection
A hate speech data set constructed using IR pooling technique to enhance diversity
bb84
A jupyter notebook containing a BB84 implementation for my QIC course mini-project.
aitviewer-skel
Aitviewer fork supporting the visualization of OpenSim models and SKEL.
INLAjoint
Joint modeling multivariate longitudinal and time-to-event outcomes with INLA
unbiased-inverse-volume-rendering
Code for the paper "Unbiased Inverse Volume Rendering with Differential Trackers"
random-seqs-ecoli
Pipeline used to analyse frequency changes of random sequences expressed in E. coli. (Fajardo Castro & Tautz, 2021)
objects-compositional-generalization
Official code for the paper "Provable Compositional Generalization for Object-Centric Learning" (ICLR 2024, oral)
soma_den_mn_model
Two compartment motor neuron (MN) pool model based on (Elias and Kohn, 2013), implemented in Brian2. Every MN is comprised by a cylindrical soma and dendrite and coupled with a model of motor unit (MU) twitch for force production. The dendrites of the MNs include L-type Ca2+ channels to simulate the effect of persistent inward currents.
dynamont
code-for-simulation-based-active-learning-for-systematic-reviews
Code visualization notebooks for "Simulation-Based Active Learning for Systematic Reviews: A Systematic Review of the Literature"
network_tda_tutorial
This repository is dedicated for the tutorial on network and topological neuroscience.
metagenomics
A Nextflow workflow for QC, evaluation, and profiling of metagenomic samples using short- and long-read technologies
python-schema-matching
A python tool using XGboost and sentence-transformers to perform schema matching task on tables.
llm_simpy_models
The SimPy models and apps generated by LLMs, deployed as a single app.
caloclouds-2
PyTorch implementation of the CaloClouds II model introduced in https://arxiv.org/abs/2309.05704
mpox-kg
Source code and data repository for paper titled "Monkeypox Knowledge Graph: A comprehensive representation embedding chemical entities and associated biology of Monkeypox "
video-manager
CLI tool for downloading and managing videos ⭐️ Star to support our work!
interval-valued-data-analysis
Interval-Valued Principal Component Analysis and Anomaly Detection
ms-atcnn
This is the codes work for: ''Mobility-Supporting A-TCNN for HLWNets''
simona-anomalydetection-gnn
Non-stationary signal analysis: detrending and anomaly detection. Source codes repository of framework on detrending sequential sensor data and anomaly detection.
known-problems
A collection of well-known problems that occur in passive acoustic monitors.
dutch-word-embeddings
Dutch word embeddings, trained on a large collection of Dutch social media messages and news/blog/forum posts.
datascout
This repo queries and gather data from different resources which can then be used to run bulk automatised annotation of microbial genomes.The different types of data are: OrthoDB and UniProt orthology data; Rfam (non coding Rna data); Transcriptomic data from ENA
webspatialscan
R package for OpenCPU backend to detect and visualize spatio-temporal disease clusters from the web
fantasy-baseball-draft-assistant-malkawi-peoples-pennington-group8
fantasy-baseball-draft-assistant-fantasy-group8 created by GitHub Classroom
opensense_sandbox
Collection of runable examples with software packages for processing opportunistic rainfall sensors
armacell
ARMA cell: a modular and effective approach for neural autoregressive modeling
mcmanamay-etal_2024_natcom
Dynamic urban land extensification is projected to lead to imbalances in the global land-carbon equilibrium
parabricks-genomics-nf
Scalable Nextflow implementation of germline alignment and short variant calling with Parabricks for NCI Gadi HPC.
zeoran
Code used in the paper "Adsorption of carbon dioxide in non-Löwenstein zeolites".
carpetfuzz-fuzzer
CarpetFuzz's fuzzer component. Belongs to CarpetFuzz main repo.
twitter-job-postings
Replication materials for the paper "280 Characters to Employment: Using Twitter to Quantify Job Vacancies"
