GitHub
Jabberwocky
Jabberwocky: an ontology-aware toolkit for manipulating text - Published in JOSS (2020)
voilence-detection-and-highlight-generation-using-bilstm
A Deep Learning model that can detect Violence with high accuracy frame wise and also for the entire video in Video Footages and Live Feeds.
turtleFSI
turtleFSI: A Robust and Monolithic FEniCS-based Fluid-Structure Interaction Solver - Published in JOSS (2020)
athena-cofee
A system to support (semi-)automated assessment of textual exercises
esg_todnet
A Tiny Object Detection Method Based on Explicit Semantic Guidance for Remote Sensing Images (IEEE GRSL 2024)
MPA
MPA: a novel cross-language API for time series analysis - Published in JOSS (2020)
frostbyte
A workflow for seasonal streamflow probabilistic forecasting based on streamflow and snow water equivalent station observations.
tiaw-tempin
Projeto sobre tempo livre inutilizado para a matéria de Trabalho Interdisciplinar: Aplicações Web do 1º período do curso de Engenharia de Software
passt
passt: An R implementation of the Probability Associator Time (PASS-T) model - Published in JOSS (2020)
my-neural-path
This Repository contains the code of my experiments which are part of my-neural-path blog which is an open diary for sharing my journey in ML/DL space— exploring concepts, sharing what I’m working on, tracking progress, and reflecting on insights along the way.
opengl-breakout
Breakout game remake in OpenGL with C++ and GLFW. Game is inspired by LearnOpenGL.com
navigate-companion-framework
Official methodology for the Navigate Support Companions — a framework for ethical, AI-powered emotional support tools. Grounded in over 160 books, clinical thinking, and real-world prompt analysis.
bacannot
Generic but comprehensive pipeline for prokaryotic genome annotation and interrogation with interactive reports and shiny app.
master-thesis
Master Thesis - Exploration and (further) development of an alternative navigation paradigm to promote critical evaluation skills in the use of user interfaces
publication-figure-retrieval
This tool provides a method for retrieving publication figure images from NIH's Entrez API based on a list of species.
nf-core-transcriptcorral
NF-core transcript corral pipeline to perform de novo assembly of RNAseq reads.
pgsc_calc
The Polygenic Score Catalog Calculator is a nextflow pipeline for polygenic score calculation
minas
Repository of proposed and combined MIxS + MInAS standardised metadata checklists using LinkML
2022_dcpt_let
MC particle transport simulations for the 2022 LET-measurements at DCPT
powerlinearitytradeoff
Accompanying files for the paper Power Linearity Trade-off
wnstatmech
Python package to compute the thermodynamics of fermions and bosons.
2024_kdvh_rr
Code to reproduce experiments in paper on hyperbolic relaxation of KdV equation.
RetentionParameterEstimator
Estimation of thermodynamic parameters for the interaction of analytes with a stationary phase in GC.
RHEOS.jl -- A Julia Package for Rheology Data Analysis
RHEOS.jl -- A Julia Package for Rheology Data Analysis - Published in JOSS (2019)
anionic_clar_fullerene_construction
Constructions of fullerenes that maximize the p-anionic Clar number for p > 0 .
figurate_numbers
Figurate Numbers generates 241 infinite sequences of plane, space, and multidimensional figurate numbers based on the book ‘Figurate Numbers’ (2012) by Elena Deza and Michel Deza. The methods are implemented using the Enumerator class and are designed for use in your math projects or in Sonic Pi.
stats-base-ztest-one-sample-results-float64
Create a one-sample Z-test double-precision floating-point results object.
nav-artefact-model
Code for reproducing "Resolving artefacts in voltage-clamp experiments with computational modelling: an application to fast sodium current recordings"
gcd-biologic
Python script to read and plot galvanostatic charge-discharge data from Biologic equipment.
face-detection-mtcnn-cropping-pipeline
A complete face detection and cropping pipeline using MTCNN, including EXIF orientation correction, metadata extraction from filenames, and structured Excel logging. This tool is designed for high-quality biometric data preprocessing from mobile and camera-acquired images.
fastapi-neo4j
Template for building FastAPI applications with Neo4j(neontology).
entropic-spacetime-framework
repo.host("ESF manuscript"); type="meta-theoretical proposal"; goal="unify physics & emergent complexity"; fields=; mechanism="resonant coupling"; addresses=; speculates=["consciousness", "QC", "life"]; status="living document"; updates=["derivations", "simulations", "feedback"]; invite_collaborators(["physics", "cosmology", "neuroscience", "AI"]).
geronimo-etal_2024_naturalhazardsreview
Tradeoff analysis for flood adaptation pathways in Ortley Beach, New Jersey
ssembatya-etal_2025_submitted_to_applied_energy
Meta repository for data and code associated with the Ssembatya et al. 2025 submission to Applied Energy
mlflow-auth-gui
A web application that provides a Web GUI to the MLflow Authentication API
Easy3D
Easy3D: a lightweight, easy-to-use, and efficient C++ library for processing and rendering 3D data - Published in JOSS (2021)
cl-pandoc-filters
This is a collection of Pandoc filters used by Caltech Library's Digital Library Development Groups