GitHub
exosim
ExoSim 2 is the next generation of the Exoplanet Observation Simulator (ExoSim) tailored for spectro-photometric observations of transiting exoplanets from space, ground, and sub-orbital platforms. This software is a complete rewrite implemented in Python 3, embracing object-oriented design principles.
essflows
MAPPING ECOSYSTEM SERVICE FLOWS IN SENEGAL: Sardinella protein flows from small scale fisheries
unsupervised-multimodal-trajectory-modeling
We use EM for a mixture of state space models to perform unsupervised clustering of short trajectories.
https://github.com/geoscienceaustralia/dea-knowledge-hub
DEA Knowledge Hub — The Knowledge Hub brings together information about Digital Earth Australia’s products and services, allowing you to utilise our free and open-source satellite imagery archive.
geobenchx
LLM-agents benchmark set of geospatial tasks requiring multi-step tool use; and LLM-as-Judge based evaluation framework.
https://github.com/geoscienceaustralia/dea-config
Config files for dea services
grasptools
A collection of tools for MCDHF based programs such as GRASP, developed by me
skillup
Semantic machine skills encapsulate behavior of manufacturing machines similar to web services in SOA and support interoperability in automation. But creating a semantic machine skill by hand is a tedious and error-prone task. Use Skill-Up to easily create machine skills automatically! Skill-Up converts a plain Java class into a skill including an ontological description and an invocation interface (OPC UA or RESTful web service)
fair_code_design
This is the repository for the Code design lecture for the FAIR4RS program at the University of Sheffield
python-interactive-data-visualizations
Creating Interactive Data Visualizations with Python
ncbi-day
Learn about NCBI toolkit, API and command line tools! *We are not officially affiliated with ncbi*
tutorials-late
Tutorials to learn accessing and analyzing social contact matrices, scenario modelling to simulate disease spread and investigate interventions, and modelling disease burden.
https://github.com/deeprine/awesome-digital-human
A collection of resources on digital human including clothed people digitalization, virtual try-on, and other related directions.
def-au-asls-landform
Machine-readable representation of the classifiers described in chapter 5 Landform, by J.G. Speight, in Australian soil and land survey field handbook (3rd edn)
uninfo
The official code for "Uniformity First: Uniformity-aware Test-time Adaptation of Vision-language Models against Image Corruption."
isabelle_dof
Isabelle/DOF is a novel Document Ontology Framework on top of Isabelle. Isabelle/DOF allows for both conventional typesetting as well as formal development.
3d_very_deep_vae
PyTorch implementations of variational autoencoders for 3D images
scientific_programming_course
Course material for Scientific Programming with Python given at University of Applied Science Bonn-Rhein-Sieg.
kromosynth-render
gRPC rendering server, accepting URLs to genomes and returning a rendered sound.
https://github.com/deeprine/awesome-continual-learning
A paper list of our recent survey on continual learning, and other useful resources in this field.
lang-gur
Finite state and Constraint Grammar based analysers and proofing tools, and language resources for the Farefare language
casos
CaΣoS is a nonlinear optimization-oriented sum-of-squares toolbox based on the symbolic framework of CasADi.
https://github.com/deepset-ai/haystack-cookbook
👩🏻🍳 A collection of example notebooks using Haystack
WilliamsonTransforms
Williamson and Inverse-Williamson transformations, in fully generic pure Julia.
spezispeech
Spezi Module to Support Speech-related Features Including Text-to-Speech and Speech-to-Text
observatorio
O Observatório é uma iniciativa que envolve o registro, o acompanhamento e a análise agregada e estruturada de dados de Programas de Pós-graduação Stricto Sensu do Brasil para divulgação transparente de suas atividades, planejamentos, ações e impactos, tornando-os acessíveis à sociedade
quark-famework
Framework for Quantum Computing Application Benchmarking (until version 2.2)
biosiftr
BioSIFTR - Biome-specific Shallow-shotgun Inference of Functional Traits through Read-mapping
orthogonalchsh
Notebooks used for my Master thesis "Exploring the boundaries of quantum correlations: Bell inequalities, convex duality and self-testing".
stabilo
🌀 Stabilo is a Python package for stabilizing video frames or object trajectories using advanced transformation techniques. It supports user-defined masks to exclude specific areas, making it ideal for dynamic scenes with moving objects. Unlike traditional stabilization, it stabilizes content relative to a chosen reference frame.
sed-eew-seiscomp-contributions
Libraries and modules for Earthquake Early Warning (EEW) contributed by the Swiss Seismological Service (SED) at ETH Zurich, base for the ETHZ-SED SeisComP EEW system (so-called ESE).
https://github.com/deepset-ai/haystack-rag-app
An example of a RAG backend plus UI
lightweight-mcnnm
Lightweight Implementation of the Matrix Completion Estimator for Panel Data presented by Athey et al. (2021)
gru_aie
A low latency implementation of the Gated Recurrent Unit on the Versal AI Engines
agent-dialogues
Conversation simulation with AI agents to evvaluate behavior changes.
cochise
Autonomous Assumed Breach Penetration-Testing Active Directory Networks
https://github.com/deepset-ai/spring-into-haystack
🌱 Sprout an Agent with Haystack & MCP
gcd
[AAAI 2025] The official repository of our paper "GCD: Advancing Vision-Language Models for Incremental Object Detection via Global Alignment and Correspondence Distillation"
ti-1-pmg-cc-m-20241-g13-falta-de-opcoes-de-dietas
ti-1-pmg-cc-m-20241-g13-falta-de-opcoes-de-dietas created by GitHub Classroom
https://github.com/deepset-ai/github-agent
GitHub Issue Resolver Agent with Anthropic Claude 3.7 Sonnet and Haystack
nextnet
C++ implementation of the NEXT-Net algorithm for efficient simulation of epidemics on complex networks
akvmodel
A Python Tool for Social Network Simulations in the Alvim-Knight-Valencia Model
https://github.com/deepset-ai/visualizer-source-text
Source text for deepset Cloud pipeline nodes
autism-sensory-model
This research project presents a novel framework for understanding autism not as a collection of behavioral symptoms, but as a set of adaptive responses to unique sensory experiences. The model challenges traditional diagnostic approaches by placing sensory processing at the center of autistic experiences.
pygmtsar
PyGMTSAR (Python InSAR): Powerful and Accessible Satellite Interferometry
template-data-package
An opinionated template for Data Packages built with Seedcase packages.
https://github.com/deepset-ai/dap-github-agent-template
A template repository showing how to build a Github Agent and deploy it on the deepset AI platform
flask-boilerplate
Flask application boilerplate based on clean architecture, domain-driven design (DDD), SOLID principle, CQRS pattern, DTO pattern, test-driven development (TDD) for building production-grade applications 🚀
https://github.com/deepset-ai/hayhooks-open-webui-docker-compose
A ready-to-use docker-compose with Hayhooks and open-webui
https://github.com/dcbr/pyvista
3D plotting and mesh analysis through a streamlined interface for the Visualization Toolkit (VTK)
3dcap-md-gen
Scripts for exporting scanning metadata as described in the publication "Metadata Schema and Ontology for Archaeological Object Documentation including 3D Imaging (AOD-3DI)"
ensemblecontrolsimulation
Supplementary code for the manuscript: Convergence rates for ensemble-based solutions to optimal control of uncertain dynamical systems
https://github.com/dcelisgarza/portfoliooptimiser.jl
Portfolio optimisation library.