GitHub
mcaat
Finding all CRISPR Arrays in Metagenomic Datasets using Graph-Based Strategies
byte-sized-rse
Byte-sized RSE is a series of standalone mini training materials each providing key research software engineering skills in around 1.5 hour
https://github.com/deepskies/noise2self
A framework for blind denoising with self-supervision.
sixarm_debian_ia32_packages
SixArm.com » Debian » IA32 packages for 32-bit / 64-bit compatibility
deepcsa
Pipeline for the analysis of the clonal structure of tissues. It takes advantage of the availability of information about the sequencing depth.
change_detection_tools
Tools to perform change detection on encoded rasters in GIS environment
iasdt.r
IASDT.R: Modelling the distribution of invasive alien plant species in Europe
additivefoam
Mirror for AdditiveFOAM https://github.com/ORNL/AdditiveFOAM: heat and mass transfer software for simulation of additive manufacturing, based on OpenFOAM
gov.nasa.pds.model:model-dmdocument
The software tools and data necessary for generating the Information Model including PDS4 ontology, data, and information model.
collectionbuilder-csv
CollectionBuilder-CSV is a "stand alone" template for creating digital collection and exhibit websites using Jekyll and a metadata CSV.
wastrumentation
Portable WebAssembly Dynamic Analysis with Support for Intercession
modernstats_python
The UNECE ModernStats proposal for using Python in Official Statistics. This website is in pre-alpha
https://github.com/deepskywonder/deepskywonder
Config files for my GitHub profile.
https://github.com/deepskywonder/deepskywonder.github.io
The Home of Deep Sky Wonder
lc-scix-open-science
This repository contains a hands-on Library Carpentry lesson on FAIR principles, advanced search techniques, ORCiD integration, and bibliographic library building using SciX.
paper-mlwa-mlpro-2.0
Paper ScienceDirect MLWA - Arend e.a. - "MLPro 2.0 - Online machine learning in Python"
def-au-scm
Machine-readable representation of the classifiers described in Soil Chemical Methods Australasia. (2011), by George E Rayment and David J Lyons. These comprise the laboratory and field chemical tests relevant to Australasia and beyond.
https://github.com/deepskywonder/rebound
💫 An open-source multi-purpose N-body code.
cgmd_pla-gr
Supplementary material to reproduce the results of the article "From Nanoscale to Printed Products: Multiscale Modeling and Experimental Characterization of Graphene-Enhanced Polylactic Acid Composites for 3D Printing."
tutorials-middle
Tutorials to learn real-time analysis that includes accessing epidemiological delays, estimating transmission metrics, forecasting, and severity from aggregated incidence data, superspreading from line list and contact data, and simulating transmission chains.
metasbt
A scalable framework for automatically indexing microbial genomes and accurately characterizing metagenome-assembled genomes with Sequence Bloom Trees
stats-strided-mskrange
Calculate the range of a strided array according to a mask.
claudian_dicesvolume
Graphs and tables from the chapter "Between epic and epideictic: direct speech in Claudian’s political poems through a digital lens" (2025)
hybridize-functions-refactoring
Refactorings for optimizing imperative TensorFlow clients for greater efficiency.
xctruntimeassertions
XCTest extensions to test runtime assertions and preconditions
thunderbolt.jl
A modular shared-memory high-performance framework for multiscale cardiac multiphysics simulations.
goombay
Python implementation of several sequence alignment algorithms such as Waterman-Smith-Beyer, Gotoh, and Needleman-Wunsch intended to calculate distance, show alignment, and display the underlying matrices.
synthetic-overhead-wind-turbines
Synthetic Overhead Images of Wind Turbines Made to Mimic California and Arizona
pypi-qiskit-connector
Qiskit connector is quantum computing SDK extension which is a helper for Qiskit runtime service that streamlines authentication, plan detection, and backend selection for quantum computing algorithms. using Qiskit connector intelligence Core.
optimizvrmsinembedd
Efficient algorithm for VRMS calculation using FFT-based velocity spectrum with down sampling, window overlap, and robust scalar selection. Designed for real-time deployment on embedded systems in Industry 4.0 condition monitoring.
monofonic
High order LPT/PPT cosmological IC generator for single resolution cosmological simulations
cessda.cmv.documentation
Contains the documentation for the CESSDA Metadata Validator (CMV).
calm-pde
Official PyTorch implementation of the CALM layers and CALM-PDE model.
sgpflowmatrices
R package containing sgpFlow coefficient matrices for sgpFlow analyses
metagenomics-shell-workbench
Preview of carpentries-lab/metagenomics-shell transitioned to use the Workbench
sort
The Self-Assessment of Organisational Readiness Tool is a self-assessment framework for organisations to evaluate and strengthen their research capabilities in healthcare practices.
genomenote
Nextflow DSL2 pipeline to generate a Genome Note, including assembly statistics, quality metrics, and Hi-C contact maps. This workflow is part of the Tree of Life production suite.
python-novice-programming-gapminder
An introduction to Python for non-programmers using Gapminder data