GitHub
land4health
Extract remote sensing metrics for spatial health analysis 🛰️, integrating vector-borne disease data. Easily compute areal and zonal statistics for infectious disease modeling in spatial epidemiology 🦠🏥
maskpls
Mask-Based Panoptic LiDAR Segmentation for Autonomous Driving, RA-L, 2023
stats-strided-dvarmtk
Calculate the variance of a double-precision floating-point strided array provided a known mean and using a one-pass textbook algorithm.
sandi
Sediment ANalysis and Delineation through Images. A free and open-source software to process particles from high-resolution underwater images and to analyze gravels from laboratory images. Designed for contour detection, shape characterization and size measurement. SANDI is intended to become a collaborative project.
cirp-lce-2025
Prospective Global Warming Potential of Australian Low-Emission Hydrogen in a Net-Zero Emission Context
densegastoolbox
Calculate density and temperature from observed molecular lines (CO, HCN, HNC, HCO+ etc)
rl-based-reactor-design-optimization
Source code for nuclear fusion reactor design optimization through deep reinforcement learning
energy-usage-prediction-weather
Weather-driven residential energy-demand modelling: data engineering + linear & logistic regression, appliance load profiling.
asp-language-support
A VSCode Extension that uses the Clingo Answer Set Solver (bundled), developed by Potassco (University of Potsdam).
array_wah
MATLAB tool for evaluating microphone array configurations via 3D localisation metrics. Generates error heatmaps and statistical insights to guide array design in acoustic research.
pyloric-network-simulator
Pure-Python, JAX-accelerate implementation of the pyloric circuit model described by Prinz et al (Nat. Neurosci., 2004)
https://github.com/dmetivie/periodichiddenmarkovmodels.jl
Non-homogenous Hidden Markov Models
pyrit
The Python Risk Identification Tool for generative AI (PyRIT) is an open source framework built to empower security professionals and engineers to proactively identify risks in generative AI systems.
avtandil-programming-language
Esoteric programming language adopted to Digital Humanities tasks. Python implementation. 🤖
https://github.com/brainlesion/preprocessing
preprocessing tools for multi-modal 3D brain imaging
https://github.com/dmetivie/pluto_export
Static export of my pluto notebooks and where I store other materials
https://github.com/broadinstitute/seqc_multiqc
Fork of MultiQC from July 2018 for seQuoia bacterial genomics infrastructure.
https://github.com/byuignite/hips
Hierarchical Parcel Swapping turbulence mixing model
https://github.com/caltechlibrary/2020-cpa-shell-git
Workshop website for January 2020 CPA Shell and Git Classes
full-stack-project-acolhe-queer-application
This Full Stack project was developed by my classmates and me as the semester conclusion project at the Puc Minas University. It was developed with C#, HTML, CSS, Java Script and Bootstrap.
control-neuralode
Neural ODEs as Feedback Policies for Nonlinear Optimal Control (IFAC 2023) https://doi.org/10.1016/j.ifacol.2023.10.1248
datafest-quarto
Workshop materials for learning how to build websites with Quarto
https://github.com/camilogarciabotero/bioatomscount.jl
Count organic atoms in a BioSequence
exaca
Mirror for ExaCA https://github.com/LLNL/ExaCA: cellular automata for alloy nucleation and solidification written with Kokkos
tgt_realtime
Code for real-time processing of shipboard instruments on the R/V Thomas G. Thompson.
https://github.com/dmetivie/abcmethods.jl
A Julia package implementing some Bayesian ABC methods
visualizations_in_r
Introductory lesson on Visualizations in R, built with Carpentries Workbench infracture
https://github.com/choderalab/broad-spectrum-asap-paper
Scripts and input files for structure-based prediction of affinity across the coronavirus family.
https://github.com/dmetivie/lux.jl
Elegant & Performant Scientific Machine Learning in Julia
computing-basics-batch
A tutorial on batch job submission and monitoring for DUNE computing.
https://github.com/dmetivie/hiddenmarkovmodels.jl
A Julia package for simulation, inference and learning of Hidden Markov Models.
terraform-google-billing-billboard
Terraform Module for Google Cloud billing billboard.
template-tiaw
Template para a disciplina de Trabalho Interdisciplinar: Aplicações Web - 1º período
https://github.com/dmetivie/fluxarchitectures.jl
Complex neural network examples for Flux.jl