GitHub

https://github.com

Updated 10 months ago

nf1_schwann_cell_morphology_signature • Science 49%

This repository contains all the modules to split and train a binary classification model to predict NF1 null and wildtype genotype.

Updated 10 months ago

vqe-ising • Science 67%

Implementing the quantum algorithms Variational Quantum Eigensolver (VQE) and Quantum Approximate Optimization Algorithm (QAOA) for a Vanderbilt University CS 8395 Special Topics - Intro to Quantum Computing final project.

Updated 10 months ago

ylac-2024-session • Science 44%

A slide deck on "Translating Research into Action" presented during the YLAC's Yound Researchers for Social Impact Program 2024

Updated 10 months ago

gradco • Science 44%

Updated 10 months ago

sns-ext • Science 54%

Minerva version for Seq-N-Slide pipeline (https://github.com/igordot/sns)

Scientific Software
Updated 10 months ago

SSAPy - Space Situational Awareness for Python — Peer-reviewed • Science 100%

SSAPy - Space Situational Awareness for Python - Published in JOSS (2025)

Mathematics
Scientific Software · Peer-reviewed
Updated 10 months ago

tiger_model • Science 54%

Updated 10 months ago

drmchain-pos • Science 44%

Implementation of the drmchain blockchain with PoDlE consensus

Updated 10 months ago

trimm-cb • Science 44%

Scientific Software
Updated 10 months ago

Tesseract Core — Peer-reviewed • Science 98%

Tesseract Core: Universal, autodiff-native software components for Simulation Intelligence - Published in JOSS (2025)

Updated 10 months ago

greenelab.com • Science 44%

The website source code for greenelab.com

Updated 10 months ago

ediff • Science 57%

Processing of electron diffraction patterns.

Updated 10 months ago

citation-network-app • Science 44%

An interactive web app that fetches the top 20 related papers from Google Scholar (via SerpAPI), builds a citation graph, and renders it in pages of 10 nodes each.

Scientific Software
Updated 10 months ago

DVMDOSTEM v0.8.3 — Peer-reviewed • Science 100%

DVMDOSTEM v0.8.3: a terrestrial ecosystem model designed to represent arctic, boreal and permafrost ecosystem dynamics - Published in JOSS (2025)

Updated 10 months ago

clowder • Science 54%

A data management system that allows users to share, annotate, organize and analyze large collections of datasets. It provides support for extensible metadata annotation using JSON-LD and a distribute analytics event bus for automatic curation of uploaded data.

Updated 10 months ago

ustat-var • Science 44%

Python package for computing unbiased variances and sampling variances of teacher means.

Scientific Software
Updated 10 months ago

GBNet — Peer-reviewed • Science 93%

GBNet: Gradient Boosting packages integrated into PyTorch - Published in JOSS (2025)

Earth and Environmental Sciences (40%) Economics (40%)
Scientific Software · Peer-reviewed
Scientific Software
Updated 10 months ago

cuisto — Peer-reviewed • Science 98%

cuisto: A Python package to quantify neurohistological data from QuPath and ABBA - Published in JOSS (2025)

Scientific Software · Peer-reviewed
Updated 10 months ago

impart • Science 54%

Interactive Multi-Physics Analysis in Real-Time

Updated 10 months ago

ggexpress • Science 44%

ggExpress is the fastest way to create, annotate and and save plots in R.

Scientific Software
Updated 10 months ago

AirFogSim — Peer-reviewed • Science 93%

AirFogSim: A Python Package for Benchmarking Collaborative Intelligence in Low-Altitude Vehicular Fog Computing - Published in JOSS (2025)

Engineering (37%)
Scientific Software · Peer-reviewed
Updated 10 months ago

kgcompass • Science 54%

Knowledge Graph Enhanced Software Repair Framework

Updated 10 months ago

ogd-website • Science 52%

The public website for Open Game Data

Scientific Software
Updated 10 months ago

SwiftPol — Peer-reviewed • Science 93%

SwiftPol: A Python package for building and parameterizing in silico polymer systems - Published in JOSS (2025)

Scientific Software · Peer-reviewed
Updated 10 months ago

cpp_bids • Science 67%

a set of matlab / octave function to create BIDS comptible folder structure and filenames

Updated 10 months ago

mpc-voting • Science 44%

Scientific Software
Updated 10 months ago

CompressedBeliefMDPs.jl — Peer-reviewed • Science 93%

CompressedBeliefMDPs.jl: A Julia Package for Solving Large POMDPs with Belief Compression - Published in JOSS (2025)

Updated 10 months ago

mcmlpy • Science 54%

Python routines to parse MCML output files

Scientific Software
Updated 10 months ago

WunDeeDB.jl — Peer-reviewed • Science 93%

WunDeeDB.jl: An easy to use, zero config, WAL, SQLite backend vector database - Published in JOSS (2025)

Scientific Software · Peer-reviewed
Updated 10 months ago

firesense_spreadpredict • Science 44%

SpaDES module to predict fire spread probabilities

Scientific Software
Updated 10 months ago

LMDiskANN.jl — Peer-reviewed • Science 93%

LMDiskANN.jl: An Implementation of the Low Memory Disk Approximate Nearest Neighbors Search Algorithm - Published in JOSS (2025)

Updated 10 months ago

fenicsr13 • Science 67%

A Tensorial Mixed Finite Element Solver for the Linear R13 Equations Using the FEniCS Computing Platform (Mirror from https://git.rwth-aachen.de/lamBOO/fenicsR13).

Scientific Software
Updated 10 months ago

FRAGMENT-MNP — Peer-reviewed • Science 98%

FRAGMENT-MNP: A model of micro- and nanoplastic fragmentation in the environment - Published in JOSS (2025)

Mathematics
Scientific Software · Peer-reviewed
Updated 10 months ago

pcmdi_metrics • Science 85%

Open-source Python package for Systematic Evaluation of Climate and Earth System Models

Updated 10 months ago

pytseb • Science 67%

A python Two Source Energy Balance model for estimation of evapotranspiration with remote sensing data

Updated 10 months ago

averify • Science 49%

a Video annotation Verification Tool

Updated 10 months ago

pia-system • Science 62%

Updated 10 months ago

iscc-sum • Science 67%

Fast Single-Pass ISCC Data-Code & Instance Code

Updated 10 months ago

violets-website • Science 44%

Source Code for Violet's Website

Updated 10 months ago

alexandria • Science 44%

Updated 10 months ago

talmudic-thinking • Science 44%

Talmudic Thinking

Updated 10 months ago

pvsc48-tracker-terrain-loss-manuscript • Science 44%

Improved modeling of PV solar power for trackers on sloping terrain. Available online: https://doi.org/10.1109/JPHOTOV.2021.3114599

Scientific Software
Updated 10 months ago

fuzzyclara — Peer-reviewed • Science 93%

fuzzyclara: Efficient Medoid-based Clustering Algorithms for Large and Fuzzy Data - Published in JOSS (2025)

Scientific Software · Peer-reviewed
Updated 10 months ago

jptranstokenizer • Science 44%

Japanese Tokenizer for transformers library

Updated 10 months ago

lc-data-intro • Science 54%

Updated 10 months ago

dl4cv • Science 44%

Open-source repository for the Deep Learning for Computer Vision course, featuring code examples, datasets, lecture slides, and project guides. Ideal for learners, developers, and researchers interested in AI-driven image and video analysis.

Scientific Software
Updated 10 months ago

The MFrontGallery project — Peer-reviewed • Science 93%

The MFrontGallery project - Published in JOSS (2025)

Updated 10 months ago

shell-novice • Science 54%

Updated 10 months ago

signedmcrt • Science 67%

Use of signed distance fields in Monte Carlo Radiative Transfer

Scientific Software
Updated 10 months ago

strauss — Peer-reviewed • Science 93%

strauss: Sonification Tools and Resources for Analysis Using Sound Synthesis - Published in JOSS (2025)

Scientific Software · Peer-reviewed
Scientific Software
Updated 10 months ago

MocoExtendProblem — Peer-reviewed • Science 93%

MocoExtendProblem: Interface Between OpenSim and MATLAB for Rapidly Developing Direct Collocation Goals in Moco - Published in JOSS (2025)

Earth and Environmental Sciences (40%)
Scientific Software · Peer-reviewed
Scientific Software
Updated 10 months ago

TopologicalNumbers.jl — Peer-reviewed • Science 98%

TopologicalNumbers.jl: A Julia package for topological number computation - Published in JOSS (2025)

Updated 10 months ago

gnu-parallel • Science 44%

Updated 10 months ago

pepc • Science 57%

Pretty Efficient Parallel Coulomb Solver

Updated 10 months ago

sfpk-main • Science 44%

Official implementation of SFPK-pruner in ICLR 2025 "Probabilistic Neural Pruning via Sparsity Evolutionary Fokker-Planck-Kolmogorov Equation"

Updated 10 months ago

collectionbuild • Science 44%

Updated 10 months ago

train-photos • Science 44%

A collection of train photos taken by Lauren Osier

Scientific Software
Updated 10 months ago

AutoPDEx — Peer-reviewed • Science 93%

AutoPDEx: An Automized Partial Differential Equation solver based on JAX - Published in JOSS (2025)

Updated 10 months ago

https://github.com/baltic-coastal-monitoring-team/s-line • Science 49%

An open-source LiDAR toolbox for dune coasts shoreline mapping.

Updated 10 months ago

spatio_temporal_aspects_of_data • Science 54%

Spatial and temporal aspects of the dendo-archaeological dataset.

Updated 10 months ago

nemiss_proper • Science 44%

nemiss code repo 2023

Updated 10 months ago

vpn-plumber • Science 44%

A Chrome extension to check if the user's IPv6 or Domain Name Servers are leaking.

Updated 10 months ago

substrait • Science 54%

A cross platform way to express data transformation, relational algebra, standardized record expression and plans.

Updated 10 months ago

masking • Science 44%

Samples of Data masking techniques

Updated 10 months ago

fvd_one • Science 44%

Updated 10 months ago

leap • Science 44%

artifact for leap submission

Updated 10 months ago

alchemiscale-fah • Science 67%

protocols and compute service for using alchemiscale with Folding@Home

Updated 10 months ago

stats-base-ztest-one-sample-results-struct-factory • Science 44%

Create a new struct constructor tailored to a specified floating-point data type.

Updated 10 months ago

pynxtools-apm • Science 54%

Harmonize atom probe tomography and related field-ion microscopy data and metadata for research data management using NeXus

Updated 10 months ago

@stdlib/array-place • Science 44%

Replace elements of an array with provided values according to a provided mask array.

Updated 10 months ago

rotation_dynamics • Science 44%

Simulation of a rotating nanorod in Julia

Updated 10 months ago

realized • Science 44%

Human-readable string serializations for many data types

Updated 10 months ago

pcb-defect-detection-using-yolov8x • Science 44%

PCB- Defect Detection using YOLOv8x a Research Project

Updated 10 months ago

fred_colombia_implementation • Science 44%

Implemetation of the agent model FRED for the description of the COVID-19 outbreak in Colombia

Updated 10 months ago

warpspeed • Science 54%

TensorFlow GSPMD implementation of Microsoft's DeepSpeed library.

Updated 10 months ago

ac • Science 44%

Updated 10 months ago

cythononpypi • Science 44%

Updated 10 months ago

biobb-pdb-tools • Science 67%

Updated 10 months ago

sixarm-swift-extensions • Science 44%

SixArm.com Swift extensions for programming

Updated 10 months ago

dba • Science 44%

PetCare DBA Admin é um sistema web avançado desenvolvido especificamente para a administração e gerenciamento de bancos de dados da plataforma PetCare. Esta ferramenta foi criada para simplificar e otimizar o trabalho de administradores de banco de dados (DBAs) em clínicas veterinárias, hospitais veterinários e sistemas de gestão pet.

Updated 10 months ago

RESIDE • Science 75%

RESIDE - R package for simulation of data from marginal distributions from TREs

Updated 10 months ago

ubervvald • Science 44%

Updated 10 months ago

plenoptic • Science 67%

Visualize/test models for visual representation by synthesizing images.

Updated 10 months ago

ts-bc-detector • Science 44%

A tool that detects Breaking changes between 2 versions of a Typescript project

Updated 10 months ago

testone • Science 67%

Updated 10 months ago

nf-site-seq • Science 57%

Nextflow bioinformatics pipeline for processing data generated by the SITE-Seq® assay

Updated 10 months ago

ill_mirror-takin2-tlibs2 • Science 54%

Mirror of my public repo at ILL.

Updated 10 months ago

evogenex • Science 52%

This repository contains the source code of the R package for EvoGeneX, a software to infer the mode of evolution from the gene expression data.