GitHub
gh-pages-about-me
A simple web page to teach students how to publish web content using GitHub Pages.
git-intro
Introduction to version control with Git - Why we want to track versions and how to go back in time to a working version
artigo_interfaces
Este repositório reúne os dados, códigos e gráficos produzidos para o artigo Interfaces de hemerotecas digitais em português na revista Matraga (UERJ)
friendly-github-intro
A Friendly Introduction to Github for Project Version Control
terminal-plotter
Terminal Plotter is script that reads numeric data from a file (by default `data.txt`) and displays it as a live-updating plot in the terminal using [plotext](https://pypi.org/project/plotext/). The plot shows a moving time window (TW) of the data, and you can interactively adjust the window's size and position using keyboard controls.
biobb-flexserv
Biobb_flexserv is a BioBB category for biomolecular flexibility studies on protein 3D structures.
mcms_pseudo_data
Repository containing all code used in my masters project. The project is the prediction of thermodynamic properties of binary mixtures using matrix completion methods.
h3fuzz
Testing framework with integrated grammar- & mutation-based fuzzer designed to test HTTP/3 (reverse) proxies for non-compliance with RFC 9114.
https://github.com/access-community-hub/access-mopper
A tool to post-process ACCESS Model output using CMOR, based on APP4, work in progress!
snspd-time-walk-and-jitter-correction
Code for analyzing and correcting for timing distortions observed in SNSPD systems at high count rates
lexicon-scholarly-editing
A Jekyll version of the Lexicon of Scholarly Editing
taguette
Free and open source qualitative research tool -- MIRROR OF GITLAB REPOSITORY
introduction-to-statistics-with-python-training
material for the "Introduction to Statistics with Python" SIB-training course
unhide-docs
Mirror of https://codebase.helmholtz.cloud/hmc/hmc-public/unhide/documentation
microrna-lung-cancer-associations
An association study to identify a robust miRNA biomarker signature at various stages of lung cancer.
https://github.com/access-nri/access-om2
ACCESS-OM2: ACCESS Ocean-Sea Ice Model
first-steps-with-r-training
repository of the 2-day course "First steps with R in Life Sciences" from SIB-training
rrwnet
Official repository of the paper "RRWNet: Recursive Refinement Network for Effective Retinal Artery/Vein Segmentation and Classification", published in Expert Systems with Applications (Dec 2024).
coolmpm
An implementation of the MPM for a final project for a course in computational finite inelasticity and multiphase mechanics.
https://github.com/access-nri/access-om2-bgc
ACCESS-OM2-BGC: ACCESS Ocean-Sea Ice Model with WOMBAT Biogeochemistry
repeatmaskerfaster
Repeat Masker optimized for running in batches on a cluster
drag-coefficient-prediction
Physics-Guided Neural Network for predicting drag coefficients of spheres in fluid flow
pride-resources
PRIDE Resources Forum (https://github.com/PRIDE-Archive/pride-resources/discussions)
mkdocs-utilizing-pyscript
Example of a mkdocs page using your own code interactively utilizing pyscript
test_datamanag
this is a test repo for the course Introduction to Research Data Management
scikit-talk
Scikit-talk is an open-source toolkit for processing collections of real-world conversational speech in Python. The toolkit aims to facilitate the exploration of large collections of transcriptions and annotations of conversational interaction.
@stdlib/random-strided-rayleigh
Fill a strided array with pseudorandom numbers drawn from a Rayleigh distribution.
https://github.com/acclab/dabest-python
Data Analysis with Bootstrapped ESTimation
array-base-cunone-by-right
Cumulatively test whether no array element in a provided array passes a test implemented by a predicate function, while iterating from right-to-left.
amocarray
Basic repository for reading AMOC transport (volume transport only) from arrays.
inferring-exon-and-intron-metadata-from-.gff-file
This pipeline infers exon functional annotations using coordinates from a .gff file and derives corresponding intron coordinates along with relevant annotations. Users can optionally specify the length of intronic fragments to extract. The pipeline is suited for splicing code analyses.
frontiersdata
Data and Statistical Analysis for "An Analysis of Dialogue Repair in Virtual Assistants"