kromosynth-evaluate • Science 49%

websocket servers for evaluating (classifying) sounds.

AuditoryStimuli.jl — Peer-reviewed • Science 98%

AuditoryStimuli.jl: A Julia package for generating real-time auditory stimuli - Published in JOSS (2021)

c14bazaar • Science 49%

R Package - Download and Prepare C14 Dates from Different Source Databases

2024-07-24-ucl-swc • Science 52%

Software Carpentry Webpage for UCL-ARC's summer SWC workshop

fintech • Science 44%

复旦大学金融科技与数据智能研究室 (Fudan University Fintech and Data Intelligence Laboratory)

samntrek • Science 44%

Locally deployable search tool to explore local Salmonella epidemiology in a global context

2025-05-27-ucl-swc • Science 62%

improved_yolov8_obb • Science 44%

2023-06-ucl-hpc-online • Science 52%

cl-pandoc-filters • Science 52%

This is a collection of Pandoc filters used by Caltech Library's Digital Library Development Groups

Easy3D — Peer-reviewed • Science 93%

Easy3D: a lightweight, easy-to-use, and efficient C++ library for processing and rendering 3D data - Published in JOSS (2021)

stromboli_2nd • Science 54%

swarnadeepseth.github.io • Science 44%

Swarnadeep Seth's personal website

starplot • Science 44%

✨ Star charts and maps in Python

nanocall • Science 44%

mlflow-auth-gui • Science 67%

A web application that provides a Web GUI to the MLflow Authentication API

ssembatya-etal_2025_submitted_to_applied_energy • Science 49%

Meta repository for data and code associated with the Ssembatya et al. 2025 submission to Applied Energy

geronimo-etal_2024_naturalhazardsreview • Science 67%

Tradeoff analysis for flood adaptation pathways in Ortley Beach, New Jersey

timehive • Science 57%

Hierarchical moving-window statistical analysis for time series.

rl-traffic-mgmt • Science 54%

face-detection-mtcnn-cropping-pipeline • Science 44%

A complete face detection and cropping pipeline using MTCNN, including EXIF orientation correction, metadata extraction from filenames, and structured Excel logging. This tool is designed for high-quality biometric data preprocessing from mobile and camera-acquired images.

codetrace • Science 62%

nav-artefact-model • Science 52%

Code for reproducing "Resolving artefacts in voltage-clamp experiments with computational modelling: an application to fast sodium current recordings"

ds4owdanalytics • Science 67%

Dark data from the DS4OWD course

cfire • Science 67%

qc • Science 54%

pipeline for quality checking of both raw and annotated assemblies

figurate_numbers • Science 44%

Figurate Numbers generates 241 infinite sequences of plane, space, and multidimensional figurate numbers based on the book ‘Figurate Numbers’ (2012) by Elena Deza and Michel Deza. The methods are implemented using the Enumerator class and are designed for use in your math projects or in Sonic Pi.

anionic_clar_fullerene_construction • Science 44%

Constructions of fullerenes that maximize the p-anionic Clar number for p > 0 .

RetentionParameterEstimator • Science 54%

Estimation of thermodynamic parameters for the interaction of analytes with a stationary phase in GC.

webbotparser • Science 44%

:mag: R package to parse search engine results

cdcm_execution • Science 65%

powerlinearitytradeoff • Science 44%

Accompanying files for the paper Power Linearity Trade-off

2022_dcpt_let • Science 49%

MC particle transport simulations for the 2022 LET-measurements at DCPT

minas • Science 67%

Repository of proposed and combined MIxS + MInAS standardised metadata checklists using LinkML

pgsc_calc • Science 49%

The Polygenic Score Catalog Calculator is a nextflow pipeline for polygenic score calculation

nf-core-transcriptcorral • Science 44%

NF-core transcript corral pipeline to perform de novo assembly of RNAseq reads.

master-thesis • Science 54%

Master Thesis - Exploration and (further) development of an alternative navigation paradigm to promote critical evaluation skills in the use of user interfaces

tiegui • Science 54%

daima

pubmedmetatools • Science 54%

fitdist • Science 54%

fitdist is a python library for probability density fitting.

diffusers • Science 44%

fundus_disease_image_classification • Science 44%

navigate-companion-framework • Science 44%

Official methodology for the Navigate Support Companions — a framework for ethical, AI-powered emotional support tools. Grounded in over 160 books, clinical thinking, and real-world prompt analysis.

flows • Science 52%

Flow selection and analysis

aria-tools • Science 44%

Tools for exploiting ARIA standard products

lis-690-de • Science 44%

hdf • Science 44%

bacannot • Science 49%

Generic but comprehensive pipeline for prokaryotic genome annotation and interrogation with interactive reports and shiny app.

lib213demo • Science 44%

publication-figure-retrieval • Science 54%

This tool provides a method for retrieving publication figure images from NIH's Entrez API based on a list of species.

wnstatmech • Science 44%

Python package to compute the thermodynamics of fermions and bosons.

stata-waffle • Science 44%

A Stata package for Waffle charts

async_tutorial • Science 44%

my-data • Science 44%

A collection of projects I am working on or have completed.

2024_kdvh_rr • Science 49%

Code to reproduce experiments in paper on hyperbolic relaxation of KdV equation.

modified-ultralytics • Science 44%

dual_lbr_fri_ros2_stack • Science 49%

RHEOS.jl -- A Julia Package for Rheology Data Analysis — Peer-reviewed • Science 95%

RHEOS.jl -- A Julia Package for Rheology Data Analysis - Published in JOSS (2019)

stats-base-ztest-one-sample-results-float64 • Science 44%

Create a one-sample Z-test double-precision floating-point results object.

yolov5-imporve-method • Science 44%

qrackmin • Science 44%

ThereminQ Qrackmin QuantOPS : HPC Qrack container images

gcd-biologic • Science 44%

Python script to read and plot galvanostatic charge-discharge data from Biologic equipment.

fastapi-neo4j • Science 44%

Template for building FastAPI applications with Neo4j(neontology).

entropic-spacetime-framework • Science 44%

repo.host("ESF manuscript"); type="meta-theoretical proposal"; goal="unify physics & emergent complexity"; fields=; mechanism="resonant coupling"; addresses=; speculates=["consciousness", "QC", "life"]; status="living document"; updates=["derivations", "simulations", "feedback"]; invite_collaborators(["physics", "cosmology", "neuroscience", "AI"]).

@stdlib/array-base-flatten5d-by • Science 44%

Flatten a five-dimensional nested array according to a callback function.

ndnd • Science 44%

Golang implementation of the Named Data Networking protocol stack

mcpmod • Science 44%

MCP-Mod for small samples with binary endpoint.

irb-kit • Science 44%

Extends IRB by providing additional productivity enhancements.

vhsjuliakurspackage.jl • Science 44%

Übungspaket für Julia-Kurs

2025-07-02_greenhpc_ucl • Science 52%

https://github.com/dmey/elefridge.jl • Science 13%

Compressing atmospheric data into its real information

oakville-land-use-classification • Science 44%

Optimizing Deep Learning Models for Classifying Urban Land Cover.

master-trajdata • Science 54%

mh1ddc • Science 67%

:earth_asia: MH1DDC is inversion software using Levenberg-Marquardt (LM) and Singular Value Decomposition (SVD) of one-dimension DC resistivity in MATLAB.

mh2dgrav • Science 57%

:earth_asia: MH2DGRAV is continuous two-dimension inversion of Gravity data based on Talwani formulation using very fast simulated annealing (VFSA) in MATLAB.

hagis • Science 59%

Analysis of Plant Pathogen Pathotype Complexities, Distributions and Diversity

2025-10-01-uwmadison-mini • Science 52%

https://github.com/dmey/ecrad • Science 13%

ECMWF atmospheric radiation scheme

kettle-soup-cover • Science 44%

A Covered Kettle of SOUP, A Code Coverage Meta Gem

6 • Science 49%

When is it favorable to do two-step or one-pot coupled enzyme reactions?

master-thesis • Science 44%

Code for my master thiesis in Theoretical Quantum Optics from Niels Bohr Institute, University of Copenhagen with supervision by Professor Klaus Mølmer

introduction-to-renv • Science 75%

Walkthrough tutorial on setting up and using renv

https://github.com/dmey/bitinformation.jl • Science 23%

Information between bits and bytes.

versatile-xr-user-identification • Science 67%

Implementation of "Versatile User Identification in Extended Reality Using Pretrained Similarity-Learning". Deep metric learning approach for identifying VR users from their movements.

nf-rsvpipeline • Science 67%

Viral RSV analysis pipeline using Illumina or Oxford Nanopore Technologies amplicon-based sequencing data

nyplaybills • Science 44%

A collection of Broadway playbills from NYC

@stdlib/array-base-strided2array3d • Science 44%

Convert a strided array to a three-dimensional nested array.

segui • Science 44%

A GUI version of the SEGUL phylogenomic tool

sigmajs — Peer-reviewed • Science 93%

sigmajs: An R htmlwidget interface to the sigma.js visualization library - Published in JOSS (2018)

stats-base-ndarray-sztest • Science 44%

Compute a one-sample Z-test for a one-dimensional single-precision floating-point ndarray.

@stdlib/complex-float32-conj • Science 44%

Return the complex conjugate of a single-precision complex floating-point number.

@stdlib/assert-is-ragged-nested-array • Science 44%

Test if a value is a ragged nested array

ndarray-base-output-dtype • Science 44%

Resolve the output data type from a list of input ndarray data types.

stats-strided-dsemwd • Science 57%

Calculate the standard error of the mean for a double-precision floating-point strided array using Welford's algorithm.

aisp-lab • Science 44%

biobb-flexdyn • Science 67%

biobb_flexdyn is a BioBB category for studies on the conformational landscape of native proteins.

ParticleScattering — Peer-reviewed • Science 95%

ParticleScattering: Solving and optimizing multiple-scattering problems in Julia - Published in JOSS (2018)

camp-lab-website • Science 44%

Source code for the CAMP Lab at TU Delft website

blas-base-ndarray-gdot • Science 44%

Compute the dot product of two one-dimensional ndarrays.

math-base-special-aversinf • Science 44%

Compute the inverse versed sine of a single-precision floating-point number (in radians).